Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS37405 and QEN71_RS37410 are separated by 160 nucleotidesQEN71_RS37410 and QEN71_RS37415 are separated by 255 nucleotidesQEN71_RS37415 and QEN71_RS37420 are separated by 478 nucleotidesQEN71_RS37420 and QEN71_RS37425 are separated by 9 nucleotides QEN71_RS37405: QEN71_RS37405 - winged helix-turn-helix domain-containing protein, at 1,759,574 to 1,762,342 _RS37405 QEN71_RS37410: QEN71_RS37410 - alpha/beta hydrolase, at 1,762,503 to 1,763,495 _RS37410 QEN71_RS37415: QEN71_RS37415 - winged helix-turn-helix domain-containing protein, at 1,763,751 to 1,766,672 _RS37415 QEN71_RS37420: QEN71_RS37420 - AraC family transcriptional regulator, at 1,767,151 to 1,768,065 _RS37420 QEN71_RS37425: QEN71_RS37425 - HlyD family secretion protein, at 1,768,075 to 1,769,040 _RS37425
Group Condition QEN71_RS37405 QEN71_RS37410 QEN71_RS37415 QEN71_RS37420 QEN71_RS37425
motility Motility_outer_sample +0.1 -0.3 -0.1 -0.4 -0.4
carbon source D-Sorbitol (C) -0.1 -0.3 -0.1 -0.3 +0.0
supernatant Filtered_supernatant_MT71_in_LB +0.0 -0.1 -0.1 -0.4 -0.3
motility Motility_inner_sample -0.2 +0.0 +0.1 -0.4 -0.3
carbon source Fumaric (C) +0.1 -0.3 -0.3 -0.1 -0.1
motility Motility_outer_sample_with_outgrowth -0.0 -0.3 -0.1 -0.3 +0.2
carbon source D,L-Lactate (C) -0.0 -0.1 +0.2 -0.1 -0.4
motility Motility_outer_sample_with_outgrowth +0.0 +0.2 +0.1 -0.6 -0.0
motility Motility_outer_sample +0.1 -0.3 -0.1 -0.2 +0.3
stress LB_noSalt with Chloride 200 mM +0.2 -0.1 -0.1 -0.5 +0.1
carbon source D-Sorbitol (C) -0.2 +0.2 -0.3 +0.2 -0.1
carbon source succinate (C) +0.1 -0.1 +0.1 -0.4 +0.2
carbon source L-Aspartic Acid (C) -0.1 +0.1 +0.3 -0.1 -0.3
carbon source succinate (C) +0.2 -0.2 +0.2 -0.3 +0.1
motility Motility_inner_sample_with_outgrowth +0.3 -0.1 +0.0 -0.4 +0.3
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 +0.1 -0.3 +0.4
supernatant Filtered_supernatant_MT81_in_LB +0.1 +0.3 +0.2 -0.4 +0.0
stress LB_noSalt with Chloride 200 mM -0.1 +0.3 -0.3 -0.0 +0.4
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.3 +0.1 -0.2 +0.0
coculture Psabiae_ML3b with MT80 +0.0 +0.1 +0.1 -0.2 +0.4
carbon source D-Fructose (C) +0.2 +0.1 +0.1 -0.2 +0.3
stress LB_noSalt with Zinc 0.5 mM +0.2 -0.1 +0.2 +0.1 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.3 -0.1 +0.4 -0.0
carbon source L-Leucine (C) +0.2 -0.0 +0.2 +0.2 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.1 +0.1 +0.1 +0.2
carbon source L-Rhamnose (C) +0.1 -0.1 +0.4 +0.1 +0.3
carbon source casaminos (C) +0.0 +0.1 +0.2 +0.2 +0.2
motility Motility_inner_sample +0.3 +0.0 -0.2 +0.4 +0.3
supernatant Filtered_supernatant_MT80_in_LB +0.2 +0.4 +0.2 +0.2 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.7 -0.1 +0.1 +0.4
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