Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS37135 and QEN71_RS37140 are separated by 184 nucleotidesQEN71_RS37140 and QEN71_RS37145 are separated by 132 nucleotidesQEN71_RS37145 and QEN71_RS37150 are separated by 15 nucleotidesQEN71_RS37150 and QEN71_RS37155 are separated by 250 nucleotides QEN71_RS37135: QEN71_RS37135 - HDOD domain-containing protein, at 1,699,231 to 1,700,697 _RS37135 QEN71_RS37140: QEN71_RS37140 - DUF3331 domain-containing protein, at 1,700,882 to 1,701,277 _RS37140 QEN71_RS37145: QEN71_RS37145 - TetR family transcriptional regulator, at 1,701,410 to 1,702,069 _RS37145 QEN71_RS37150: QEN71_RS37150 - hypothetical protein, at 1,702,085 to 1,702,354 _RS37150 QEN71_RS37155: QEN71_RS37155 - LysR substrate-binding domain-containing protein, at 1,702,605 to 1,703,015 _RS37155
Group Condition QEN71_RS37135 QEN71_RS37140 QEN71_RS37145 QEN71_RS37150 QEN71_RS37155
motility Motility_outer_sample_with_outgrowth -1.4 +0.1 -5.8 -0.7 -1.5
motility Motility_outer_sample_with_outgrowth -1.4 -0.1 -5.8 -0.3 -1.1
motility Motility_outer_sample_with_outgrowth -1.4 +0.1 -5.7 -0.7 -0.1
motility Motility_outer_sample -1.3 +0.5 -5.7 -0.1 -1.1
motility Motility_outer_sample_with_outgrowth -1.4 +0.4 -5.8 -0.6 -0.3
motility Motility_outer_sample -1.0 +0.4 -5.9 +0.1 +0.3
motility Motility_inner_sample -0.4 -0.1 -5.1 -0.5 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.2 -5.7 +0.2 +0.0
motility Motility_inner_sample -0.5 -0.2 -2.9 -0.3 -0.7
motility Motility_inner_sample_with_outgrowth -0.3 +0.1 -4.1 -0.1 -0.1
motility Motility_inner_sample -0.5 +0.2 -3.8 -0.0 +0.3
motility Motility_inner_sample_with_outgrowth -0.4 -0.5 -2.5 -0.2 -0.1
motility Motility_inner_sample -0.6 +0.3 -2.5 +0.0 -0.2
carbon source D-Glucose (C) +0.2 -0.2 -2.2 -0.0 -0.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.1 -2.3 +0.1 -0.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.1 -1.4 -0.6 -0.7
stress LB_noSalt with Chloride 200 mM -0.0 -0.5 -0.4 +0.2 -1.6
stress LB_noSalt with Cobalt chloride 0.25 mM +0.0 +0.3 -1.5 -0.3 -0.7
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 -0.1 -1.9 -0.1 +0.2
stress LB_noSalt with Chloride 200 mM -0.0 +0.1 -1.2 +0.1 -1.0
stress LB_noSalt with Chloride 200 mM -0.2 +0.2 -0.6 +0.1 -1.4
supernatant Filtered_supernatant_MT183_in_LB +0.2 +0.3 -1.5 +0.0 -0.9
carbon source D,L-Lactate (C) -0.0 +0.6 -1.6 -0.0 -0.6
carbon source L-Rhamnose (C) +0.1 -0.1 -1.5 -0.1 -0.2
carbon source casaminos (C) +0.1 +0.0 -1.2 +0.1 -0.6
carbon source D-Xylose (C) +0.2 -0.7 -1.0 -0.1 +0.3
carbon source Fumaric (C) +0.2 +0.3 -1.2 +0.2 +0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 -0.8 +1.1 +0.2 -0.7
stress LB_noSalt with Zinc 0.5 mM -0.2 -0.2 +2.8 -0.2 -0.9
stress LB_noSalt with Zinc 0.5 mM -0.1 -0.2 +2.8 +0.3 -0.9
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