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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS35320 and QEN71_RS35325 are separated by 369 nucleotides
QEN71_RS35325 and QEN71_RS35330 overlap by 4 nucleotides
QEN71_RS35330 and QEN71_RS35335 are separated by 523 nucleotides
QEN71_RS35335 and QEN71_RS35340 are separated by 545 nucleotides
QEN71_RS35320: QEN71_RS35320 - HU family DNA-binding protein, at 1,276,071 to 1,276,349
_RS35320
QEN71_RS35325: QEN71_RS35325 - hypothetical protein, at 1,276,719 to 1,279,082
_RS35325
QEN71_RS35330: QEN71_RS35330 - alpha/beta fold hydrolase, at 1,279,079 to 1,280,410
_RS35330
QEN71_RS35335: QEN71_RS35335 - hypothetical protein, at 1,280,934 to 1,281,692
_RS35335
QEN71_RS35340: QEN71_RS35340 - aminotransferase class III-fold pyridoxal phosphate-dependent enzyme, at 1,282,238 to 1,283,602
_RS35340
Group
Condition
QEN71
_RS35320
QEN71
_RS35325
QEN71
_RS35330
QEN71
_RS35335
QEN71
_RS35340
motility
Motility_outer_sample_with_outgrowth
-0.8
-0.0
-0.1
-0.7
-0.3
stress
LB_noSalt with Chloride 200 mM
-0.7
-0.1
-0.2
-0.1
-0.3
stress
LB_noSalt with Chloride 200 mM
-0.8
-0.0
-0.2
-0.3
-0.0
motility
Motility_outer_sample
-0.5
-0.1
+0.1
-0.3
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.9
-0.1
+0.2
-0.5
+0.2
motility
Motility_outer_sample
-0.0
-0.0
+0.1
-0.8
-0.2
carbon source
casaminos (C)
-1.1
+0.0
-0.0
+0.3
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.0
-0.2
-0.4
-0.3
carbon source
L-Histidine (C)
-0.6
+0.0
-0.1
-0.2
+0.1
carbon source
L-Leucine (C)
-0.8
-0.1
+0.2
-0.1
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.3
-0.0
-0.6
-0.2
motility
Motility_inner_sample
+0.6
-0.1
-0.4
+0.0
-0.2
motility
Motility_inner_sample_with_outgrowth
+0.5
-0.1
-0.2
-0.2
-0.1
carbon source
D,L-Lactate (C)
+0.4
+0.1
-0.1
-0.4
+0.0
motility
Motility_inner_sample
+0.6
+0.0
-0.2
+0.1
-0.5
carbon source
Fumaric (C)
+0.4
+0.1
-0.1
-0.3
+0.1
motility
Motility_outer_sample_with_outgrowth
+0.5
+0.1
+0.1
-0.6
+0.0
stress
LB_noSalt with Zinc 0.5 mM
+0.7
+0.1
-0.4
-0.2
-0.0
carbon source
D-Glucose (C)
+0.4
+0.0
-0.3
+0.3
-0.0
motility
Motility_outer_sample_with_outgrowth
+0.6
-0.0
+0.2
-0.3
+0.1
supernatant
Filtered_supernatant_MT80_in_LB
+0.9
-0.0
+0.2
-0.4
-0.1
supernatant
Filtered_supernatant_MT81_in_LB
+0.8
+0.1
+0.1
-0.2
-0.1
motility
Motility_inner_sample
+0.6
+0.1
+0.2
+0.1
-0.3
carbon source
L-Rhamnose (C)
+0.8
-0.0
+0.0
-0.1
+0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
+0.6
-0.0
-0.1
+0.6
-0.2
motility
Motility_outer_sample_with_outgrowth
+1.0
-0.1
+0.3
+0.0
-0.1
carbon source
succinate (C)
+0.9
+0.1
+0.3
-0.3
+0.1
carbon source
D-Sorbitol (C)
+0.6
+0.2
-0.2
+0.6
-0.0
carbon source
D,L-Malic Acid (C)
+0.3
+0.1
+0.1
+0.6
+0.1
carbon source
Fumaric (C)
+0.9
-0.1
+0.1
+0.5
+0.1
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QEN71_RS35330
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