Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS34480 and QEN71_RS34485 are separated by 184 nucleotidesQEN71_RS34485 and QEN71_RS34490 are separated by 30 nucleotidesQEN71_RS34490 and QEN71_RS34495 are separated by 29 nucleotidesQEN71_RS34495 and QEN71_RS34500 are separated by 27 nucleotides QEN71_RS34480: QEN71_RS34480 - porin, at 1,050,181 to 1,051,395 _RS34480 QEN71_RS34485: QEN71_RS34485 - FAD-binding oxidoreductase, at 1,051,580 to 1,052,881 _RS34485 QEN71_RS34490: QEN71_RS34490 - cupin domain-containing protein, at 1,052,912 to 1,053,280 _RS34490 QEN71_RS34495: QEN71_RS34495 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 1,053,310 to 1,054,251 _RS34495 QEN71_RS34500: QEN71_RS34500 - chloride channel protein, at 1,054,279 to 1,056,099 _RS34500
Group Condition QEN71_RS34480 QEN71_RS34485 QEN71_RS34490 QEN71_RS34495 QEN71_RS34500
motility Motility_outer_sample_with_outgrowth -0.1 +0.3 -1.9 -0.1 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.5 -0.5 -0.4 -0.2
motility Motility_outer_sample_with_outgrowth -0.0 +0.3 -1.1 -0.5 +0.0
motility Motility_inner_sample +0.0 +0.0 -0.9 -0.3 +0.0
motility Motility_outer_sample_with_outgrowth -0.1 +0.5 -1.5 +0.1 -0.1
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.2 -0.9 -0.1 -0.1
motility Motility_outer_sample +0.2 -0.0 -1.0 -0.1 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.1 -0.3 -0.3 +0.1
motility Motility_outer_sample_with_outgrowth +0.0 +0.3 -0.9 -0.3 +0.0
motility Motility_outer_sample -0.2 +0.5 -1.5 +0.4 -0.0
coculture Psabiae_ML3b with MT80 +0.1 +0.0 -0.6 -0.3 +0.0
motility Motility_inner_sample_with_outgrowth +0.1 +0.1 -0.8 -0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.0 -0.3 -0.5 +0.2
motility Motility_inner_sample_with_outgrowth -0.1 +0.3 -0.6 -0.1 -0.1
motility Motility_inner_sample -0.0 +0.3 -0.3 -0.4 +0.0
carbon source L-Glutamic (C) -0.0 +0.1 -0.7 +0.2 +0.0
carbon source L-Leucine (C) -0.1 +0.3 -0.8 +0.1 +0.1
carbon source D-Fructose (C) +0.1 +0.1 +0.2 -0.5 -0.2
stress LB_noSalt with Chloride 200 mM -0.0 +0.4 -0.6 -0.1 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.3 -0.5 -0.1 +0.1
carbon source succinate (C) -0.2 +0.0 -0.5 +0.4 +0.0
supernatant Filtered_supernatant_MT71_in_LB -0.0 +0.2 -0.6 +0.4 -0.1
carbon source D,L-Malic Acid (C) +0.1 -0.0 -0.4 -0.1 +0.4
motility Motility_inner_sample -0.3 +0.4 -0.2 +0.3 -0.2
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.5 -0.4 +0.1 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.0 -0.4 +1.1 +0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.1 +0.4 +0.4 -0.4
carbon source D-Sorbitol (C) +0.4 +0.2 +0.3 +0.1 -0.1
stress LB_noSalt with Chloride 200 mM +0.1 +0.1 -0.3 +0.7 +0.2
carbon source L-Histidine (C) +0.3 +0.4 +0.1 -0.1 +0.2
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