Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS34300 and QEN71_RS34305 are separated by 72 nucleotidesQEN71_RS34305 and QEN71_RS34310 are separated by 212 nucleotidesQEN71_RS34310 and QEN71_RS34315 are separated by 289 nucleotidesQEN71_RS34315 and QEN71_RS34320 are separated by 195 nucleotides QEN71_RS34300: QEN71_RS34300 - proline racemase family protein, at 1,011,520 to 1,012,551 _RS34300 QEN71_RS34305: QEN71_RS34305 - GntR family transcriptional regulator, at 1,012,624 to 1,013,331 _RS34305 QEN71_RS34310: QEN71_RS34310 - hypothetical protein, at 1,013,544 to 1,013,858 _RS34310 QEN71_RS34315: QEN71_RS34315 - serine hydroxymethyltransferase, at 1,014,148 to 1,015,398 _RS34315 QEN71_RS34320: QEN71_RS34320 - helix-turn-helix domain-containing protein, at 1,015,594 to 1,016,589 _RS34320
Group Condition QEN71_RS34300 QEN71_RS34305 QEN71_RS34310 QEN71_RS34315 QEN71_RS34320
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.3 -2.5 +0.2 -0.4 -0.5
carbon source D-Fructose (C) -0.2 -3.4 -0.1 +0.2 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -1.6 -0.2 -0.0 -0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.6 -0.2 +0.2 -0.1
carbon source D,L-Lactate (C) -0.2 -2.3 +0.8 -0.3 -0.2
motility Motility_outer_sample_with_outgrowth -0.6 -1.4 -0.4 +0.1 +0.2
carbon source D,L-Malic Acid (C) -0.4 -1.5 -0.0 +0.0 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -1.7 -0.1 +0.1 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.1 -1.6 -0.1 +0.0 -0.1
carbon source D-Sorbitol (C) +0.1 -1.6 -0.2 -0.1 +0.1
motility Motility_outer_sample -1.0 +0.3 -0.3 -0.7 -0.0
carbon source D-Fructose (C) +0.0 -1.5 -0.4 +0.3 -0.0
carbon source L-Histidine (C) -0.7 -0.9 +0.0 +0.1 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.0 -0.5 -1.0 -0.0 +0.1
supernatant Filtered_supernatant_MT81_in_LB +0.1 -1.3 -0.0 +0.3 -0.3
carbon source D-Sorbitol (C) +0.2 -1.1 -0.4 -0.2 +0.1
carbon source L-Rhamnose (C) +0.1 -1.8 +0.6 +0.0 -0.1
carbon source D-Glucose (C) +0.1 -1.4 +0.2 -0.2 +0.1
carbon source Fumaric (C) -0.6 -1.4 +0.6 +0.5 -0.4
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 -2.1 +0.1 +0.3 +0.1
supernatant Filtered_supernatant_MT183_in_LB -0.3 -0.8 +0.3 +0.3 -0.4
carbon source D-Xylose (C) +0.0 -1.8 +0.6 +0.5 -0.2
carbon source L-Glutamic (C) -0.2 -0.9 +0.5 -0.0 -0.3
carbon source L-Rhamnose (C) +0.1 -1.2 +0.2 +0.4 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -1.4 +0.3 +0.4 +0.1
carbon source D,L-Malic Acid (C) -0.5 +0.1 +0.6 -0.1 -0.4
stress LB_noSalt with Chloride 200 mM -0.7 -0.5 +0.1 +0.7 +0.1
stress LB_noSalt with Chloride 200 mM -0.2 -0.7 +0.4 +0.2 +0.2
stress LB_noSalt with Chloride 200 mM -0.4 -0.1 +0.9 -0.0 -0.4
motility Motility_outer_sample +0.1 +0.6 +0.9 +0.2 +0.1
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