Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS32965 and QEN71_RS32970 are separated by 27 nucleotidesQEN71_RS32970 and QEN71_RS32975 overlap by 4 nucleotidesQEN71_RS32975 and QEN71_RS32980 are separated by 7 nucleotidesQEN71_RS32980 and QEN71_RS32985 are separated by 12 nucleotides QEN71_RS32965: QEN71_RS32965 - AI-2E family transporter, at 723,400 to 724,503 _RS32965 QEN71_RS32970: QEN71_RS32970 - efflux transporter outer membrane subunit, at 724,531 to 726,072 _RS32970 QEN71_RS32975: QEN71_RS32975 - HlyD family secretion protein, at 726,069 to 727,223 _RS32975 QEN71_RS32980: QEN71_RS32980 - DUF2955 domain-containing protein, at 727,231 to 728,274 _RS32980 QEN71_RS32985: QEN71_RS32985 - potassium channel family protein, at 728,287 to 728,673 _RS32985
Group Condition QEN71_RS32965 QEN71_RS32970 QEN71_RS32975 QEN71_RS32980 QEN71_RS32985
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.0 -0.1 -1.7 -0.7
carbon source L-Histidine (C) -0.3 -0.0 -0.1 -0.4 -1.4
supernatant Filtered_supernatant_MT80_in_LB -0.3 -0.4 +0.2 -0.4 -0.9
carbon source L-Aspartic Acid (C) -0.3 -0.1 -0.2 -0.3 -0.8
stress LB_noSalt with Chloride 200 mM +0.2 -0.4 -0.0 +0.0 -1.5
stress LB_noSalt with Cobalt chloride 0.25 mM -0.8 +0.0 +0.4 +0.2 -1.5
carbon source Fumaric (C) +0.5 -0.1 -0.2 -0.7 -1.1
motility Motility_inner_sample -0.1 -0.2 +0.2 +0.3 -1.6
motility Motility_outer_sample_with_outgrowth +0.1 +0.0 +0.5 +0.1 -2.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.3 +0.2 +0.4 -1.6
motility Motility_inner_sample -0.6 +0.2 -0.2 +0.1 -0.9
motility Motility_outer_sample_with_outgrowth +0.4 -0.1 -0.3 -0.0 -1.3
supernatant Filtered_supernatant_MT71_in_LB -0.4 +0.3 +0.2 -0.6 -0.5
supernatant Filtered_supernatant_MT81_in_LB +0.0 -0.0 +0.2 -0.1 -1.1
carbon source D-Sorbitol (C) +0.4 +0.2 -0.3 -0.0 -0.9
carbon source D,L-Malic Acid (C) +0.1 +0.2 +0.5 -1.1 -0.2
carbon source L-Leucine (C) +0.7 -0.3 -0.1 -0.1 -0.4
carbon source L-Histidine (C) +0.7 -0.1 -0.1 -0.1 -0.4
coculture Psabiae_ML3b with MT81 +0.4 -0.3 -0.2 -0.3 +0.3
motility Motility_outer_sample_with_outgrowth -0.2 -0.3 +0.4 +0.7 -0.5
coculture Psabiae_ML3b with MT80 -0.1 +0.1 +0.2 +0.4 -0.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.2 +0.6 -0.1 +0.1
motility Motility_outer_sample_with_outgrowth +0.7 -0.1 -0.0 -0.2 -0.3
motility Motility_outer_sample -0.6 +0.1 -0.1 +0.5 +0.3
carbon source L-Aspartic Acid (C) +0.4 -0.1 +0.1 -0.5 +0.4
carbon source D-Sorbitol (C) +0.0 -0.6 +0.0 +0.2 +0.6
carbon source 2-Deoxy-D-Ribose (C) +0.4 +0.0 +0.2 -0.8 +0.5
carbon source 2-Deoxy-D-Ribose (C) +0.5 -0.3 +0.3 -0.3 +0.3
stress LB_noSalt with Zinc 0.5 mM +0.0 +0.1 +0.5 -0.3 +0.4
carbon source L-Glutamic (C) +0.3 -0.2 +0.4 +0.6 -0.1
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