Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS32745 and QEN71_RS32750 are separated by 426 nucleotidesQEN71_RS32750 and QEN71_RS32755 overlap by 26 nucleotidesQEN71_RS32755 and QEN71_RS32760 are separated by 395 nucleotidesQEN71_RS32760 and QEN71_RS32765 are separated by 38 nucleotides QEN71_RS32745: QEN71_RS32745 - DUF447 family protein, at 680,123 to 680,734 _RS32745 QEN71_RS32750: QEN71_RS32750 - hypothetical protein, at 681,161 to 681,463 _RS32750 QEN71_RS32755: QEN71_RS32755 - pyrroloquinoline quinone precursor peptide PqqA, at 681,438 to 681,512 _RS32755 QEN71_RS32760: QEN71_RS32760 - form I ribulose bisphosphate carboxylase large subunit, at 681,908 to 683,398 _RS32760 QEN71_RS32765: QEN71_RS32765 - ribulose bisphosphate carboxylase small subunit, at 683,437 to 683,838 _RS32765
Group Condition QEN71_RS32745 QEN71_RS32750 QEN71_RS32755 QEN71_RS32760 QEN71_RS32765
carbon source D-Fructose (C) -0.3 N.D. -0.7 -0.2 -0.5
carbon source L-Aspartic Acid (C) -0.4 N.D. -0.3 -0.1 -0.4
motility Motility_inner_sample +0.0 N.D. -0.2 -0.2 -0.6
stress LB_noSalt with Cobalt chloride 0.25 mM +0.0 N.D. -0.3 -0.3 -0.4
stress LB_noSalt with Zinc 0.5 mM -0.3 N.D. -0.4 -0.5 +0.1
carbon source Fumaric (C) -0.0 N.D. -0.5 -0.0 -0.4
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. -0.4 -0.2 -0.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. -0.6 -0.3 -0.5
carbon source L-Leucine (C) -0.0 N.D. -0.9 +0.0 +0.0
carbon source casaminos (C) -0.1 N.D. -0.4 +0.1 -0.5
carbon source 2-Deoxy-D-Ribose (C) -0.1 N.D. +0.1 -0.0 -0.8
supernatant Filtered_supernatant_MT71_in_LB -0.5 N.D. -0.7 +0.2 +0.2
motility Motility_inner_sample -0.1 N.D. -0.6 -0.4 +0.4
carbon source L-Leucine (C) -0.3 N.D. -0.5 -0.2 +0.4
carbon source D-Xylose (C) +0.4 N.D. -0.1 -0.4 -0.3
carbon source D-Glucose (C) -0.4 N.D. -0.4 +0.1 +0.3
coculture Psabiae_ML3b with MT80 +0.3 N.D. -0.2 -0.1 -0.3
motility Motility_outer_sample -0.2 N.D. -0.6 -0.1 +0.5
coculture Psabiae_ML3b with MT81 -0.5 N.D. -0.2 +0.5 -0.0
carbon source D,L-Malic Acid (C) +0.6 N.D. -0.6 +0.1 -0.3
carbon source casaminos (C) -0.0 N.D. -0.6 +0.4 +0.1
motility Motility_inner_sample_with_outgrowth -0.2 N.D. -0.4 +0.0 +0.5
motility Motility_outer_sample_with_outgrowth -0.0 N.D. -0.4 +0.0 +0.5
motility Motility_outer_sample -0.5 N.D. -0.3 +0.3 +1.0
motility Motility_inner_sample -0.1 N.D. -0.4 +0.2 +0.8
carbon source L-Glutamic (C) -0.3 N.D. +0.2 +0.0 +0.6
carbon source L-Aspartic Acid (C) -0.2 N.D. +0.0 +0.2 +0.6
motility Motility_inner_sample_with_outgrowth -0.2 N.D. +0.0 +0.2 +0.5
motility Motility_outer_sample_with_outgrowth +0.1 N.D. -0.0 -0.1 +0.8
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. +0.3 -0.1 +0.3
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