Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS32115 and QEN71_RS32120 are separated by 86 nucleotidesQEN71_RS32120 and QEN71_RS32125 are separated by 45 nucleotidesQEN71_RS32125 and QEN71_RS32130 are separated by 21 nucleotidesQEN71_RS32130 and QEN71_RS32135 are separated by 49 nucleotides QEN71_RS32115: QEN71_RS32115 - acetoacetyl-CoA reductase, at 548,260 to 549,003 _RS32115 QEN71_RS32120: QEN71_RS32120 - hypothetical protein, at 549,090 to 549,266 _RS32120 QEN71_RS32125: QEN71_RS32125 - hypothetical protein, at 549,312 to 549,470 _RS32125 QEN71_RS32130: QEN71_RS32130 - LysR substrate-binding domain-containing protein, at 549,492 to 550,739 _RS32130 QEN71_RS32135: QEN71_RS32135 - GntR family transcriptional regulator, at 550,789 to 551,490 _RS32135
Group Condition QEN71_RS32115 QEN71_RS32120 QEN71_RS32125 QEN71_RS32130 QEN71_RS32135
carbon source L-Histidine (C) -0.8 N.D. -0.7 -0.3 +0.0
motility Motility_inner_sample -0.7 N.D. -0.9 +0.1 -0.0
motility Motility_inner_sample -0.1 N.D. -0.7 -0.2 -0.4
carbon source L-Leucine (C) -0.8 N.D. -0.3 +0.2 -0.1
carbon source D-Sorbitol (C) -0.9 N.D. -0.3 -0.1 +0.5
carbon source casaminos (C) -0.9 N.D. -0.2 +0.0 +0.3
carbon source L-Aspartic Acid (C) -0.5 N.D. -0.3 -0.1 +0.2
supernatant Filtered_supernatant_MT80_in_LB +0.0 N.D. -0.7 -0.2 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. -1.7 +0.1 +0.6
supernatant Filtered_supernatant_MT71_in_LB -0.6 N.D. -0.3 +0.3 +0.2
carbon source D,L-Lactate (C) +0.5 N.D. -0.3 +0.1 -0.5
carbon source D-Glucose (C) +0.6 N.D. -0.7 -0.1 +0.0
carbon source Fumaric (C) +0.3 N.D. -0.7 -0.1 +0.4
motility Motility_inner_sample_with_outgrowth +0.7 N.D. -0.6 +0.2 -0.5
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 N.D. +0.2 -0.0 +0.5
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. +0.4 -0.2 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 N.D. -0.7 -0.2 +0.2
carbon source L-Glutamic (C) -0.6 N.D. +0.3 +0.3 +0.2
motility Motility_outer_sample_with_outgrowth +1.4 N.D. -0.3 +0.0 -0.5
carbon source L-Rhamnose (C) +0.6 N.D. -0.4 +0.3 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. -0.2 +0.0 +0.1
motility Motility_outer_sample +1.1 N.D. -0.2 +0.2 -0.3
carbon source D-Fructose (C) +0.4 N.D. +0.2 -0.1 +0.4
carbon source L-Rhamnose (C) +0.2 N.D. +0.4 +0.4 -0.0
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 N.D. +0.6 +0.3 +0.1
motility Motility_outer_sample_with_outgrowth +0.9 N.D. +0.0 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) +1.4 N.D. -0.3 +0.1 +0.2
carbon source D,L-Malic Acid (C) +0.3 N.D. +0.8 -0.1 +0.4
motility Motility_outer_sample +0.9 N.D. +0.3 +0.2 -0.0
carbon source D-Xylose (C) +0.6 N.D. +0.4 +0.2 +0.4
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