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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS31830 and QEN71_RS31835 are separated by 80 nucleotides
QEN71_RS31835 and QEN71_RS31840 are separated by 77 nucleotides
QEN71_RS31840 and QEN71_RS31845 are separated by 212 nucleotides
QEN71_RS31845 and QEN71_RS31850 are separated by 21 nucleotides
QEN71_RS31830: QEN71_RS31830 - helix-turn-helix domain-containing GNAT family N-acetyltransferase, at 492,959 to 493,963
_RS31830
QEN71_RS31835: QEN71_RS31835 - thioredoxin family protein, at 494,044 to 494,595
_RS31835
QEN71_RS31840: QEN71_RS31840 - glucosidase, at 494,673 to 497,417
_RS31840
QEN71_RS31845: QEN71_RS31845 - pseudouridine-5'-phosphate glycosidase, at 497,630 to 498,556
_RS31845
QEN71_RS31850: QEN71_RS31850 - molybdopterin-dependent oxidoreductase, at 498,578 to 499,174
_RS31850
Group
Condition
QEN71
_RS31830
QEN71
_RS31835
QEN71
_RS31840
QEN71
_RS31845
QEN71
_RS31850
stress
LB_noSalt with Zinc 0.5 mM
-0.0
-0.1
+0.1
-0.8
+0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.0
-0.0
+0.1
-1.0
+0.2
carbon source
L-Aspartic Acid (C)
-0.1
+0.2
+0.1
-1.1
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.2
-0.2
+0.2
-0.6
-0.2
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.1
+0.2
-0.8
-0.2
carbon source
D,L-Malic Acid (C)
+0.1
-0.3
+0.1
-0.4
+0.1
motility
Motility_inner_sample_with_outgrowth
+0.1
-0.3
+0.1
-0.4
+0.1
stress
LB_noSalt with Zinc 0.5 mM
-0.3
+0.1
+0.3
-0.7
+0.1
carbon source
D-Fructose (C)
+0.1
+0.2
+0.2
-0.9
-0.0
carbon source
L-Glutamic (C)
-0.3
+0.2
+0.1
-0.4
-0.0
carbon source
L-Aspartic Acid (C)
+0.2
-0.5
+0.1
-0.4
+0.3
motility
Motility_outer_sample
+0.2
+0.1
+0.3
-0.8
-0.1
motility
Motility_inner_sample_with_outgrowth
+0.2
-0.2
+0.0
-0.4
+0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.3
-0.4
+0.1
-0.3
+0.1
carbon source
D-Sorbitol (C)
+0.1
-0.3
+0.2
-0.2
+0.1
carbon source
Fumaric (C)
-0.0
-0.3
+0.2
-0.2
+0.2
motility
Motility_inner_sample
+0.2
+0.2
-0.1
-0.3
-0.0
supernatant
Filtered_supernatant_MT81_in_LB
+0.1
+0.2
+0.2
-0.5
+0.2
supernatant
Filtered_supernatant_MT183_in_LB
+0.2
+0.3
+0.2
-0.7
+0.1
carbon source
L-Glutamic (C)
+0.3
+0.4
+0.0
-0.6
+0.2
carbon source
succinate (C)
+0.3
+0.2
+0.1
-0.3
+0.0
carbon source
L-Rhamnose (C)
-0.0
+0.3
+0.2
-0.3
+0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.6
-0.2
+0.2
-0.3
+0.4
carbon source
D-Glucose (C)
+0.5
+0.1
+0.1
-0.3
+0.3
carbon source
L-Leucine (C)
+0.2
-0.1
+0.2
+0.3
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.0
+0.1
+0.2
+0.4
+0.1
motility
Motility_outer_sample_with_outgrowth
+0.1
+0.2
-0.0
+0.4
+0.3
carbon source
D-Sorbitol (C)
+0.2
+0.2
+0.2
+0.6
-0.1
supernatant
Filtered_supernatant_MT71_in_LB
+0.4
+0.1
+0.1
+0.3
+0.3
carbon source
D-Xylose (C)
+0.6
+0.1
+0.4
+0.5
+0.0
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QEN71_RS31840
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