Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS31480 and QEN71_RS31485 are separated by 43 nucleotidesQEN71_RS31485 and QEN71_RS31490 are separated by 5 nucleotidesQEN71_RS31490 and QEN71_RS31495 overlap by 1 nucleotidesQEN71_RS31495 and QEN71_RS31500 are separated by 51 nucleotides QEN71_RS31480: QEN71_RS31480 - ATP-binding cassette domain-containing protein, at 412,845 to 413,924 _RS31480 QEN71_RS31485: QEN71_RS31485 - ABC transporter substrate-binding protein, at 413,968 to 415,467 _RS31485 QEN71_RS31490: QEN71_RS31490 - ABC transporter permease, at 415,473 to 416,417 _RS31490 QEN71_RS31495: QEN71_RS31495 - ABC transporter permease, at 416,417 to 417,301 _RS31495 QEN71_RS31500: QEN71_RS31500 - gamma-glutamyltransferase family protein, at 417,353 to 418,990 _RS31500
Group Condition QEN71_RS31480 QEN71_RS31485 QEN71_RS31490 QEN71_RS31495 QEN71_RS31500
carbon source D-Xylose (C) -0.4 -0.1 -0.4 -0.7 -0.6
carbon source D-Fructose (C) -0.1 +0.1 -0.5 -0.7 -0.1
carbon source L-Rhamnose (C) +0.1 +0.0 -0.6 -0.6 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 +0.0 -0.3 -0.4 +0.0
carbon source Fumaric (C) -0.2 +0.0 -0.0 -0.7 +0.1
motility Motility_outer_sample +0.0 -0.0 -0.2 -0.7 +0.1
motility Motility_outer_sample -0.7 -0.1 +0.8 -0.5 -0.1
motility Motility_outer_sample_with_outgrowth -0.2 +0.3 -0.0 -0.7 -0.1
carbon source D-Sorbitol (C) +0.1 +0.3 +0.0 -0.8 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.1 -0.1 +0.3 -0.2
carbon source D,L-Malic Acid (C) -0.2 +0.2 -0.2 -0.3 +0.1
carbon source D-Sorbitol (C) -0.2 +0.2 -0.5 +0.2 -0.1
carbon source succinate (C) -0.2 +0.1 +0.4 -0.1 -0.2
stress LB_noSalt with Chloride 200 mM +0.1 +0.2 +0.5 -0.8 +0.1
motility Motility_outer_sample_with_outgrowth -0.1 +0.2 +0.6 -0.8 +0.2
carbon source casaminos (C) -0.3 -0.2 +0.6 +0.0 +0.0
motility Motility_outer_sample_with_outgrowth -0.4 +0.1 +0.3 +0.1 +0.2
coculture Psabiae_ML3b with MT80 -0.1 +0.0 -0.2 +0.6 -0.1
motility Motility_inner_sample -0.2 +0.1 +0.2 +0.5 -0.3
stress LB_noSalt with Zinc 0.5 mM -0.3 +0.2 +0.6 -0.2 -0.0
supernatant Filtered_supernatant_MT80_in_LB -0.1 -0.0 -0.1 +0.7 -0.1
motility Motility_inner_sample +0.1 -0.0 +0.3 +0.3 -0.2
stress LB_noSalt with Chloride 200 mM -0.4 +0.1 +0.4 +0.3 +0.0
carbon source L-Glutamic (C) -0.2 +0.2 +0.3 +0.3 +0.1
carbon source L-Leucine (C) +0.2 -0.0 +0.2 +0.5 -0.2
stress LB_noSalt with Chloride 200 mM -0.1 +0.2 +0.5 -0.2 +0.3
supernatant Filtered_supernatant_MT183_in_LB -0.2 -0.0 +0.3 +0.7 -0.1
supernatant Filtered_supernatant_MT71_in_LB -0.1 -0.2 +0.4 +0.6 +0.1
carbon source casaminos (C) +0.1 +0.1 +0.4 +0.3 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.2 +1.1 +0.0 -0.1
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QEN71_RS31480
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