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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS31350 and QEN71_RS31355 are separated by 38 nucleotides
QEN71_RS31355 and QEN71_RS31360 are separated by 48 nucleotides
QEN71_RS31360 and QEN71_RS31365 are separated by 150 nucleotides
QEN71_RS31365 and QEN71_RS31370 are separated by 381 nucleotides
QEN71_RS31350: QEN71_RS31350 - acetolactate synthase large subunit, at 380,944 to 382,494
_RS31350
QEN71_RS31355: QEN71_RS31355 - phosphate ABC transporter substrate-binding protein, at 382,533 to 383,426
_RS31355
QEN71_RS31360: QEN71_RS31360 - MFS transporter, at 383,475 to 384,776
_RS31360
QEN71_RS31365: QEN71_RS31365 - MFS transporter, at 384,927 to 386,192
_RS31365
QEN71_RS31370: QEN71_RS31370 - aldehyde dehydrogenase (NADP(+)), at 386,574 to 388,175
_RS31370
Group
Condition
QEN71
_RS31350
QEN71
_RS31355
QEN71
_RS31360
QEN71
_RS31365
QEN71
_RS31370
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.3
+0.1
-1.4
-0.3
motility
Motility_inner_sample
+0.1
-1.0
-0.1
-0.7
-0.1
motility
Motility_inner_sample_with_outgrowth
+0.1
-0.4
-0.2
-0.5
-0.7
carbon source
L-Histidine (C)
-0.0
-1.1
-0.5
+0.2
-0.2
carbon source
D,L-Lactate (C)
-0.1
-0.3
-0.5
-0.2
-0.4
carbon source
L-Aspartic Acid (C)
-0.3
-0.3
+0.2
-0.9
-0.1
carbon source
D-Sorbitol (C)
-0.1
-0.1
+0.1
-0.4
-0.9
coculture
Psabiae_ML3b with MT80
-0.2
-0.8
+0.0
-0.3
-0.2
carbon source
L-Leucine (C)
-0.2
+0.4
-0.3
-0.8
-0.5
carbon source
2-Deoxy-D-Ribose (C)
-0.0
-0.1
-0.5
-0.3
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.2
-0.3
-0.5
-0.7
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-0.5
-0.4
-0.3
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.2
-0.9
+0.1
-0.3
+0.0
carbon source
D,L-Lactate (C)
-0.1
+0.5
-0.3
-0.1
-0.7
motility
Motility_inner_sample
-0.0
+0.6
-0.3
-0.5
-0.3
motility
Motility_outer_sample_with_outgrowth
+0.2
+0.5
-0.2
-0.4
-0.6
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.2
-0.9
+0.2
-0.2
motility
Motility_inner_sample_with_outgrowth
+0.0
-0.5
-0.2
+0.6
-0.1
carbon source
Fumaric (C)
-0.2
+0.2
-0.2
+0.5
-0.5
carbon source
succinate (C)
+0.3
-0.1
+0.0
+0.3
-0.6
motility
Motility_outer_sample_with_outgrowth
+0.1
+0.6
-0.6
+0.2
-0.3
carbon source
L-Histidine (C)
+0.3
-0.1
-0.3
+0.4
-0.1
carbon source
L-Rhamnose (C)
-0.1
-0.0
-0.0
+0.7
-0.4
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.4
+0.2
+0.2
+0.3
motility
Motility_inner_sample
+0.1
-0.5
+0.2
+0.9
-0.1
carbon source
L-Glutamic (C)
-0.1
+0.5
-0.2
+0.4
-0.1
stress
LB_noSalt with Chloride 200 mM
+0.1
+0.6
-0.2
+0.3
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.1
+0.3
+1.4
-0.6
stress
LB_noSalt with Zinc 0.5 mM
+0.2
+0.7
-0.1
+0.1
-0.2
motility
Motility_outer_sample
-0.2
+0.9
+0.3
+0.8
-0.2
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QEN71_RS31360
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