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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS30125 and QEN71_RS30130 are separated by 7 nucleotides
QEN71_RS30130 and QEN71_RS30135 are separated by 112 nucleotides
QEN71_RS30135 and QEN71_RS30140 are separated by 23 nucleotides
QEN71_RS30140 and QEN71_RS30145 are separated by 320 nucleotides
QEN71_RS30125: QEN71_RS30125 - DUF445 family protein, at 112,422 to 113,702
_RS30125
QEN71_RS30130: QEN71_RS30130 - hypothetical protein, at 113,710 to 114,033
_RS30130
QEN71_RS30135: QEN71_RS30135 - MOSC domain-containing protein, at 114,146 to 114,649
_RS30135
QEN71_RS30140: QEN71_RS30140 - peptide-methionine (R)-S-oxide reductase MsrB, at 114,673 to 115,125
_RS30140
QEN71_RS30145: QEN71_RS30145 - DNA-3-methyladenine glycosylase I, at 115,446 to 116,141
_RS30145
Group
Condition
QEN71
_RS30125
QEN71
_RS30130
QEN71
_RS30135
QEN71
_RS30140
QEN71
_RS30145
stress
LB_noSalt with Chloride 200 mM
-0.1
-0.0
-1.8
-0.1
-0.0
motility
Motility_outer_sample_with_outgrowth
-0.0
-0.3
-1.3
+0.3
-0.0
carbon source
Fumaric (C)
+0.1
+0.3
-2.1
+0.0
+0.3
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.4
-0.9
+0.1
-0.2
carbon source
L-Histidine (C)
-0.1
+0.1
-0.8
+0.0
-0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.2
-0.6
+0.1
-0.2
carbon source
casaminos (C)
+0.0
+0.2
-1.4
-0.1
+0.2
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.5
-1.0
+0.1
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.2
-0.7
-0.1
+0.2
carbon source
L-Rhamnose (C)
-0.1
-0.3
-0.8
+0.2
+0.0
carbon source
L-Rhamnose (C)
-0.0
-0.0
-1.0
+0.3
+0.0
motility
Motility_outer_sample
-0.3
-0.2
-0.3
+0.3
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.0
-0.2
-1.0
-0.1
+0.5
carbon source
L-Leucine (C)
+0.2
+0.2
-1.1
-0.2
+0.2
stress
LB_noSalt with Chloride 200 mM
+0.2
+0.1
-1.7
+0.4
+0.4
carbon source
succinate (C)
-0.0
+0.2
-0.9
+0.1
+0.1
supernatant
Filtered_supernatant_MT81_in_LB
+0.2
+0.2
-0.5
-0.0
-0.3
carbon source
D,L-Lactate (C)
-0.1
+0.1
-0.5
+0.3
+0.1
carbon source
D,L-Malic Acid (C)
-0.2
+0.3
-0.5
+0.1
+0.0
coculture
Psabiae_ML3b with MT80
+0.2
+0.2
-0.4
+0.2
-0.4
stress
LB_noSalt with Zinc 0.5 mM
+0.1
-0.1
-0.5
+0.6
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.1
-0.3
+0.3
+0.5
motility
Motility_inner_sample
+0.1
-0.4
+0.7
-0.1
+0.1
stress
LB_noSalt with Zinc 0.5 mM
+0.2
-0.3
+0.3
+0.0
+0.4
motility
Motility_outer_sample_with_outgrowth
-0.0
-0.3
+0.8
+0.2
-0.0
motility
Motility_outer_sample
-0.1
-0.2
+0.6
+0.2
+0.4
carbon source
D-Sorbitol (C)
+0.1
+0.2
+0.6
+0.3
-0.2
carbon source
casaminos (C)
-0.1
+0.1
+0.3
+0.3
+0.5
supernatant
Filtered_supernatant_MT183_in_LB
+0.1
+0.1
+0.4
+0.4
+0.3
carbon source
D-Fructose (C)
+0.1
-0.1
+0.8
+0.5
+0.1
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QEN71_RS30135
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