Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS29885 and QEN71_RS29890 are separated by 60 nucleotidesQEN71_RS29890 and QEN71_RS29895 are separated by 101 nucleotidesQEN71_RS29895 and QEN71_RS29900 are separated by 8 nucleotidesQEN71_RS29900 and QEN71_RS29905 overlap by 4 nucleotides QEN71_RS29885: QEN71_RS29885 - ATP-binding protein, at 51,356 to 52,609 _RS29885 QEN71_RS29890: QEN71_RS29890 - RcnB family protein, at 52,670 to 53,074 _RS29890 QEN71_RS29895: QEN71_RS29895 - hypothetical protein, at 53,176 to 53,838 _RS29895 QEN71_RS29900: QEN71_RS29900 - glycine zipper family protein, at 53,847 to 54,776 _RS29900 QEN71_RS29905: QEN71_RS29905 - PAAR domain-containing protein, at 54,773 to 55,324 _RS29905
Group Condition QEN71_RS29885 QEN71_RS29890 QEN71_RS29895 QEN71_RS29900 QEN71_RS29905
carbon source D-Fructose (C) +0.0 -2.4 -0.9 +0.1 -0.2
motility Motility_outer_sample_with_outgrowth -0.4 -1.3 -0.7 +0.1 -1.0
stress LB_noSalt with Zinc 0.5 mM +0.1 -1.8 -0.7 -0.1 -0.3
coculture Psabiae_ML3b with MT81 +0.1 -0.6 -1.2 -0.3 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 -1.3 -1.1 -0.1 -0.3
carbon source D,L-Lactate (C) +0.2 +0.1 -1.8 -0.2 -0.5
carbon source succinate (C) -0.1 -0.8 -0.6 -0.1 -0.3
carbon source D,L-Malic Acid (C) +0.1 +0.2 -1.7 +0.2 -0.6
motility Motility_outer_sample_with_outgrowth -0.1 -0.3 -0.7 +0.0 -0.7
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 -1.8 -0.0 -0.0 -0.2
carbon source casaminos (C) +0.1 -1.5 -0.3 +0.0 +0.2
carbon source D-Sorbitol (C) -0.6 -0.3 -0.3 +0.1 -0.3
supernatant Filtered_supernatant_MT80_in_LB +0.1 -0.2 -0.8 -0.2 -0.3
carbon source Fumaric (C) -0.2 -1.3 +0.1 +0.3 -0.1
carbon source L-Glutamic (C) +0.0 -1.3 -0.5 +0.1 +0.5
motility Motility_outer_sample -0.2 -0.4 -0.7 +0.2 +0.0
carbon source succinate (C) -0.2 -0.5 +0.3 +0.1 -0.7
motility Motility_inner_sample -0.1 -1.0 +0.3 +0.1 -0.2
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 -0.4 -0.9 +0.1 +0.3
carbon source D-Fructose (C) +0.2 +0.3 -1.1 +0.3 -0.3
carbon source L-Aspartic Acid (C) +0.2 -0.1 -1.2 +0.1 +0.3
motility Motility_outer_sample_with_outgrowth -0.3 -0.1 +0.5 +0.2 -1.0
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.0 -1.0 +0.3 +0.2
motility Motility_inner_sample -0.1 +0.4 -0.9 +0.2 +0.0
carbon source D-Glucose (C) -0.1 -0.7 +0.6 +0.0 -0.2
motility Motility_outer_sample_with_outgrowth -0.1 +0.4 -0.3 +0.2 -0.5
supernatant Filtered_supernatant_MT183_in_LB -0.0 +0.1 -1.0 +0.2 +0.5
stress LB_noSalt with Chloride 200 mM -0.0 -0.6 -0.3 -0.0 +0.7
coculture Psabiae_ML3b with MT80 +0.0 -0.6 +0.8 -0.0 -0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.8 +1.3 +0.1 -0.3
remove
QEN71_RS29885
plot		 remove
QEN71_RS29890
plot		 remove
QEN71_RS29895		 remove
QEN71_RS29900
plot		 remove
QEN71_RS29905
plot