Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS29830 and QEN71_RS29835 are separated by 7 nucleotidesQEN71_RS29835 and QEN71_RS29840 are separated by 128 nucleotidesQEN71_RS29840 and QEN71_RS29845 overlap by 4 nucleotidesQEN71_RS29845 and QEN71_RS29850 overlap by 4 nucleotides QEN71_RS29830: QEN71_RS29830 - amino acid ABC transporter permease, at 32,905 to 33,636 _RS29830 QEN71_RS29835: QEN71_RS29835 - ABC transporter substrate-binding protein, at 33,644 to 34,462 _RS29835 QEN71_RS29840: QEN71_RS29840 - efflux transporter outer membrane subunit, at 34,591 to 36,084 _RS29840 QEN71_RS29845: QEN71_RS29845 - efflux RND transporter permease subunit, at 36,081 to 39,173 _RS29845 QEN71_RS29850: QEN71_RS29850 - efflux RND transporter permease subunit, at 39,170 to 42,283 _RS29850
Group Condition QEN71_RS29830 QEN71_RS29835 QEN71_RS29840 QEN71_RS29845 QEN71_RS29850
coculture Psabiae_ML3b with MT81 -0.3 -2.1 -0.2 +0.0 +0.0
motility Motility_outer_sample_with_outgrowth +0.1 -1.9 -0.3 +0.2 -0.0
carbon source D-Sorbitol (C) -0.4 -0.7 -0.5 -0.3 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.5 +0.1 -0.2 -0.5
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.7 -0.0 +0.1 -0.2
carbon source L-Aspartic Acid (C) -0.2 -0.4 -0.2 -0.1 -0.1
carbon source D-Fructose (C) +0.0 -0.9 +0.2 -0.1 -0.2
stress LB_noSalt with Chloride 200 mM -0.3 -0.7 -0.1 +0.1 +0.1
supernatant Filtered_supernatant_MT80_in_LB -0.4 -0.3 -0.2 -0.1 +0.2
supernatant Filtered_supernatant_MT183_in_LB -0.2 -0.9 +0.1 +0.0 +0.1
carbon source D,L-Malic Acid (C) -0.6 -0.0 +0.2 -0.2 -0.2
supernatant Filtered_supernatant_MT71_in_LB +0.1 -0.4 -0.0 +0.1 -0.5
motility Motility_outer_sample +0.4 -1.0 -0.0 +0.1 -0.1
stress LB_noSalt with Chloride 200 mM -0.4 -0.8 +0.4 +0.2 +0.1
carbon source L-Glutamic (C) -0.2 -0.4 +0.2 -0.3 +0.1
carbon source Fumaric (C) +0.1 -0.3 -0.4 +0.1 +0.1
carbon source L-Glutamic (C) -0.2 +0.4 -0.4 -0.1 +0.2
carbon source L-Histidine (C) -0.3 -0.2 +0.5 -0.0 -0.0
stress LB_noSalt with Chloride 200 mM +0.1 +0.5 -0.7 -0.1 +0.1
carbon source L-Histidine (C) -0.5 +0.1 +0.2 +0.1 +0.0
carbon source D-Fructose (C) -0.4 +0.2 +0.1 -0.1 +0.2
carbon source D-Glucose (C) -0.3 +0.5 -0.1 -0.0 -0.1
motility Motility_inner_sample -0.2 +0.8 -0.3 -0.3 +0.1
motility Motility_inner_sample -0.1 +0.5 +0.1 -0.1 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.7 +0.1 +0.0 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 +1.4 -0.1 -0.0 -0.1
carbon source D,L-Malic Acid (C) +0.0 +0.8 -0.2 +0.2 -0.0
carbon source casaminos (C) -0.1 +0.7 +0.0 +0.1 +0.2
carbon source Fumaric (C) +0.1 +0.3 +0.3 +0.1 +0.2
carbon source casaminos (C) +0.1 +0.9 +0.0 +0.1 +0.0
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