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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS29130 and QEN71_RS29135 are separated by 34 nucleotides
QEN71_RS29135 and QEN71_RS29140 are separated by 445 nucleotides
QEN71_RS29140 and QEN71_RS29145 are separated by 367 nucleotides
QEN71_RS29145 and QEN71_RS29150 are separated by 62 nucleotides
QEN71_RS29130: QEN71_RS29130 - tetratricopeptide repeat protein, at 6,457,911 to 6,460,037
_RS29130
QEN71_RS29135: QEN71_RS29135 - glycosyltransferase, at 6,460,072 to 6,460,761
_RS29135
QEN71_RS29140: QEN71_RS29140 - methyltransferase domain-containing protein, at 6,461,207 to 6,462,910
_RS29140
QEN71_RS29145: QEN71_RS29145 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 6,463,278 to 6,464,354
_RS29145
QEN71_RS29150: QEN71_RS29150 - hypothetical protein, at 6,464,417 to 6,465,403
_RS29150
Group
Condition
QEN71
_RS29130
QEN71
_RS29135
QEN71
_RS29140
QEN71
_RS29145
QEN71
_RS29150
motility
Motility_outer_sample_with_outgrowth
-2.9
-6.2
-1.1
-4.5
-1.2
motility
Motility_outer_sample_with_outgrowth
-3.1
-6.1
-1.0
-4.2
-1.3
motility
Motility_outer_sample
-3.0
-6.0
-1.0
-4.0
-1.5
motility
Motility_outer_sample_with_outgrowth
-3.0
-6.2
-1.1
-4.1
-1.1
motility
Motility_outer_sample_with_outgrowth
-2.9
-6.1
-1.1
-4.1
-0.9
motility
Motility_outer_sample
-3.0
-6.3
-0.9
-4.0
-0.8
motility
Motility_inner_sample
-1.6
-2.6
-0.2
-0.6
-0.3
motility
Motility_inner_sample
-1.2
-2.5
-0.1
-0.5
-0.5
motility
Motility_inner_sample_with_outgrowth
-1.3
-2.2
-0.2
-0.9
-0.0
motility
Motility_inner_sample
-1.4
-2.2
-0.1
-0.7
-0.0
motility
Motility_inner_sample
-1.3
-1.9
-0.4
-0.7
-0.1
motility
Motility_inner_sample_with_outgrowth
-1.1
-1.7
-0.3
-0.7
-0.0
carbon source
D-Xylose (C)
+0.2
+0.4
+0.4
+0.5
-0.1
carbon source
D,L-Lactate (C)
+0.3
+0.4
+0.3
+0.4
+0.2
carbon source
succinate (C)
+0.3
+0.5
+0.2
+0.5
+0.1
carbon source
L-Leucine (C)
+0.4
+0.5
+0.2
+0.6
+0.1
carbon source
D-Sorbitol (C)
+0.4
+0.6
+0.3
+0.4
+0.1
carbon source
D-Sorbitol (C)
+0.5
+0.5
+0.2
+0.5
+0.1
carbon source
D-Glucose (C)
+0.4
+0.5
+0.4
+0.5
+0.2
carbon source
L-Rhamnose (C)
+0.5
+0.5
+0.5
+0.5
+0.2
carbon source
D-Glucose (C)
+0.3
+0.6
+0.5
+0.6
+0.3
carbon source
L-Leucine (C)
+0.3
+0.6
+0.4
+0.6
+0.5
carbon source
L-Rhamnose (C)
+0.5
+0.6
+0.5
+0.5
+0.3
carbon source
D-Fructose (C)
+0.6
+0.7
+0.5
+0.8
+0.1
carbon source
D-Fructose (C)
+0.5
+0.7
+0.5
+0.9
+0.2
carbon source
succinate (C)
+0.6
+0.8
+0.5
+0.7
+0.5
carbon source
L-Aspartic Acid (C)
+0.7
+1.0
+0.5
+0.8
+0.3
carbon source
L-Aspartic Acid (C)
+0.8
+1.0
+0.5
+0.7
+0.4
carbon source
D,L-Malic Acid (C)
+0.8
+1.1
+0.5
+0.8
+0.4
carbon source
D,L-Malic Acid (C)
+1.0
+1.3
+0.6
+0.9
+0.6
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