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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS29040 and QEN71_RS29045 are separated by 302 nucleotides
QEN71_RS29045 and QEN71_RS29050 are separated by 289 nucleotides
QEN71_RS29050 and QEN71_RS29055 are separated by 369 nucleotides
QEN71_RS29055 and QEN71_RS29060 are separated by 88 nucleotides
QEN71_RS29040: QEN71_RS29040 - glycosyltransferase family 4 protein, at 6,437,399 to 6,438,463
_RS29040
QEN71_RS29045: QEN71_RS29045 - H-NS histone family protein, at 6,438,766 to 6,439,068
_RS29045
QEN71_RS29050: QEN71_RS29050 - aquaporin Z, at 6,439,358 to 6,440,107
_RS29050
QEN71_RS29055: QEN71_RS29055 - hypothetical protein, at 6,440,477 to 6,440,779
_RS29055
QEN71_RS29060: QEN71_RS29060 - Cof-type HAD-IIB family hydrolase, at 6,440,868 to 6,441,689
_RS29060
Group
Condition
QEN71
_RS29040
QEN71
_RS29045
QEN71
_RS29050
QEN71
_RS29055
QEN71
_RS29060
motility
Motility_outer_sample
-1.2
+0.5
-0.0
-0.1
-0.1
motility
Motility_outer_sample
-1.5
+0.4
-0.1
+0.3
+0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.0
-0.5
-0.1
+0.1
-0.1
carbon source
succinate (C)
+0.2
-0.5
-0.0
-0.1
-0.0
motility
Motility_outer_sample_with_outgrowth
-1.3
+0.7
+0.0
+0.1
+0.1
carbon source
succinate (C)
-0.1
-0.3
+0.2
-0.1
+0.0
carbon source
L-Glutamic (C)
-0.1
-0.3
+0.1
+0.0
+0.0
motility
Motility_outer_sample_with_outgrowth
-1.3
+0.8
-0.1
+0.1
+0.2
motility
Motility_inner_sample
-0.5
+0.2
-0.0
+0.1
-0.0
motility
Motility_inner_sample_with_outgrowth
-0.4
+0.0
+0.0
+0.0
+0.1
motility
Motility_outer_sample_with_outgrowth
-1.0
+0.8
+0.1
-0.1
+0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.2
+0.1
+0.2
-0.2
-0.0
carbon source
D-Fructose (C)
+0.2
-0.3
+0.1
+0.0
-0.1
motility
Motility_outer_sample_with_outgrowth
-1.1
+0.7
+0.1
+0.2
+0.0
carbon source
D-Fructose (C)
+0.3
-0.4
+0.1
+0.1
-0.2
carbon source
D-Glucose (C)
+0.3
-0.3
+0.2
-0.0
-0.3
carbon source
D,L-Malic Acid (C)
+0.3
-0.5
+0.1
+0.1
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.0
-0.3
+0.2
+0.0
+0.1
motility
Motility_inner_sample_with_outgrowth
-0.4
+0.2
-0.0
+0.1
+0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.1
-0.4
+0.2
+0.1
+0.1
carbon source
L-Rhamnose (C)
+0.2
-0.2
+0.1
+0.0
-0.1
carbon source
D-Glucose (C)
+0.5
-0.4
+0.1
+0.2
-0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.2
+0.1
+0.1
+0.2
+0.0
carbon source
D-Xylose (C)
+0.3
-0.1
+0.1
+0.0
-0.1
motility
Motility_inner_sample
-0.4
+0.2
+0.4
-0.0
+0.1
motility
Motility_inner_sample
-0.3
+0.6
-0.1
+0.1
+0.1
carbon source
L-Histidine (C)
+0.4
-0.3
+0.1
+0.2
-0.0
carbon source
L-Rhamnose (C)
+0.5
-0.1
+0.1
+0.0
-0.1
carbon source
D,L-Malic Acid (C)
+0.1
-0.1
+0.1
+0.4
+0.1
stress
LB_noSalt with Zinc 0.5 mM
+0.1
+0.1
+0.1
+0.2
+0.0
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