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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS29030 and QEN71_RS29035 are separated by 129 nucleotides
QEN71_RS29035 and QEN71_RS29040 are separated by 675 nucleotides
QEN71_RS29040 and QEN71_RS29045 are separated by 302 nucleotides
QEN71_RS29045 and QEN71_RS29050 are separated by 289 nucleotides
QEN71_RS29030: QEN71_RS29030 - flagellar transcriptional regulator FlhC, at 6,435,662 to 6,436,273
_RS29030
QEN71_RS29035: QEN71_RS29035 - flagellar transcriptional regulator FlhD, at 6,436,403 to 6,436,723
_RS29035
QEN71_RS29040: QEN71_RS29040 - glycosyltransferase family 4 protein, at 6,437,399 to 6,438,463
_RS29040
QEN71_RS29045: QEN71_RS29045 - H-NS histone family protein, at 6,438,766 to 6,439,068
_RS29045
QEN71_RS29050: QEN71_RS29050 - aquaporin Z, at 6,439,358 to 6,440,107
_RS29050
Group
Condition
QEN71
_RS29030
QEN71
_RS29035
QEN71
_RS29040
QEN71
_RS29045
QEN71
_RS29050
motility
Motility_outer_sample
-2.7
-8.7
-1.5
+0.4
-0.1
motility
Motility_outer_sample_with_outgrowth
-3.1
-8.7
-1.3
+0.8
-0.1
motility
Motility_outer_sample_with_outgrowth
-3.1
-8.6
-1.1
+0.7
+0.1
motility
Motility_outer_sample_with_outgrowth
-2.7
-8.2
-1.0
+0.8
+0.1
motility
Motility_outer_sample
-2.6
-7.5
-1.2
+0.5
-0.0
motility
Motility_outer_sample_with_outgrowth
-2.7
-7.5
-1.3
+0.7
+0.0
motility
Motility_inner_sample
-0.7
-3.6
-0.5
+0.2
-0.0
motility
Motility_inner_sample
-0.8
-3.5
-0.4
+0.2
+0.4
motility
Motility_inner_sample
-0.7
-2.9
-0.2
-0.2
-0.0
motility
Motility_inner_sample_with_outgrowth
-0.7
-2.7
-0.4
+0.0
+0.0
motility
Motility_inner_sample
-0.8
-2.9
-0.3
+0.6
-0.1
motility
Motility_inner_sample_with_outgrowth
-0.7
-2.6
-0.4
+0.2
-0.0
carbon source
succinate (C)
+0.3
+1.0
+0.2
-0.5
-0.0
carbon source
2-Deoxy-D-Ribose (C)
+0.4
+0.9
+0.1
-0.4
+0.2
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
+1.7
+0.0
-0.5
-0.1
carbon source
L-Leucine (C)
+0.4
+1.3
+0.2
-0.1
+0.0
carbon source
D-Sorbitol (C)
+0.5
+1.7
+0.1
-0.4
+0.0
carbon source
D,L-Malic Acid (C)
+0.5
+1.6
+0.3
-0.5
+0.1
carbon source
D,L-Malic Acid (C)
+0.4
+1.4
+0.1
-0.1
+0.1
carbon source
L-Histidine (C)
+0.5
+1.3
+0.4
-0.3
+0.1
carbon source
L-Aspartic Acid (C)
+0.4
+1.3
+0.1
-0.0
+0.2
carbon source
L-Histidine (C)
+0.5
+1.3
+0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+0.5
+1.4
+0.5
-0.4
+0.1
carbon source
D-Fructose (C)
+0.5
+1.7
+0.2
-0.3
+0.1
carbon source
D-Xylose (C)
+0.7
+1.4
+0.3
-0.1
+0.1
carbon source
D-Fructose (C)
+0.5
+1.9
+0.3
-0.4
+0.1
carbon source
D-Glucose (C)
+0.5
+1.7
+0.3
-0.3
+0.2
carbon source
L-Rhamnose (C)
+0.6
+1.9
+0.2
-0.2
+0.1
carbon source
D-Sorbitol (C)
+0.5
+1.8
+0.4
-0.0
+0.0
carbon source
L-Rhamnose (C)
+0.6
+1.8
+0.5
-0.1
+0.1
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