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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS29010 and QEN71_RS29015 are separated by 73 nucleotides
QEN71_RS29015 and QEN71_RS29020 are separated by 69 nucleotides
QEN71_RS29020 and QEN71_RS29025 are separated by 12 nucleotides
QEN71_RS29025 and QEN71_RS29030 are separated by 171 nucleotides
QEN71_RS29010: QEN71_RS29010 - chemotaxis protein CheA, at 6,430,684 to 6,432,999
_RS29010
QEN71_RS29015: QEN71_RS29015 - response regulator, at 6,433,073 to 6,433,435
_RS29015
QEN71_RS29020: QEN71_RS29020 - flagellar motor protein MotB, at 6,433,505 to 6,434,617
_RS29020
QEN71_RS29025: QEN71_RS29025 - flagellar motor stator protein MotA, at 6,434,630 to 6,435,490
_RS29025
QEN71_RS29030: QEN71_RS29030 - flagellar transcriptional regulator FlhC, at 6,435,662 to 6,436,273
_RS29030
Group
Condition
QEN71
_RS29010
QEN71
_RS29015
QEN71
_RS29020
QEN71
_RS29025
QEN71
_RS29030
motility
Motility_outer_sample
-6.1
-2.9
-4.2
-7.2
-2.7
motility
Motility_outer_sample_with_outgrowth
-6.0
-1.6
-5.1
-7.2
-3.1
motility
Motility_outer_sample_with_outgrowth
-6.1
-2.1
-4.2
-7.2
-2.7
motility
Motility_outer_sample_with_outgrowth
-6.0
-0.8
-4.8
-7.1
-3.1
motility
Motility_outer_sample_with_outgrowth
-6.0
-0.7
-4.7
-7.1
-2.7
motility
Motility_outer_sample
-6.2
-0.4
-4.6
-7.3
-2.6
motility
Motility_inner_sample
-4.1
-1.0
-3.1
-3.5
-0.7
motility
Motility_inner_sample_with_outgrowth
-5.0
-0.8
-2.4
-2.4
-0.7
motility
Motility_inner_sample
-4.5
-0.5
-2.6
-2.9
-0.7
motility
Motility_inner_sample
-4.3
+0.1
-2.9
-3.2
-0.8
motility
Motility_inner_sample
-4.5
-0.8
-2.2
-2.7
-0.8
motility
Motility_inner_sample_with_outgrowth
-4.2
-1.3
-2.1
-2.2
-0.7
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.2
-0.5
-0.4
-0.2
+0.4
stress
LB_noSalt with Chloride 200 mM
-0.8
-0.9
-0.1
+0.0
+0.1
carbon source
Fumaric (C)
-1.1
-0.8
+0.4
+0.2
+0.2
carbon source
D-Glucose (C)
-1.3
-1.0
+0.5
+0.5
+0.5
carbon source
D-Glucose (C)
-1.7
-0.5
+0.5
+0.5
+0.5
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-1.2
+0.4
+0.3
+0.3
carbon source
D-Fructose (C)
-0.4
-1.4
+0.7
+0.3
+0.5
carbon source
L-Rhamnose (C)
-0.6
-0.5
+0.3
-0.0
+0.6
carbon source
Fumaric (C)
-0.5
-0.6
+0.4
+0.3
+0.3
carbon source
L-Rhamnose (C)
-0.6
-0.3
+0.3
-0.1
+0.6
carbon source
succinate (C)
-0.7
-0.3
+0.5
+0.3
+0.2
carbon source
D-Sorbitol (C)
-0.3
-0.6
+0.4
+0.1
+0.5
carbon source
casaminos (C)
-0.7
-0.1
+0.3
+0.3
+0.5
carbon source
D,L-Malic Acid (C)
-1.1
-0.0
+0.7
+0.8
+0.4
carbon source
D,L-Malic Acid (C)
-0.9
+0.4
+0.9
+0.9
+0.5
carbon source
L-Aspartic Acid (C)
-0.0
+0.2
+1.0
+1.0
+0.3
carbon source
L-Aspartic Acid (C)
+0.1
+0.8
+1.1
+1.1
+0.4
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+4.1
-0.4
+3.6
+3.7
+0.3
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