Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS28535 and QEN71_RS28540 overlap by 4 nucleotidesQEN71_RS28540 and QEN71_RS28545 are separated by 265 nucleotidesQEN71_RS28545 and QEN71_RS28550 are separated by 347 nucleotidesQEN71_RS28550 and QEN71_RS28555 are separated by 278 nucleotides QEN71_RS28535: QEN71_RS28535 - hypothetical protein, at 6,329,490 to 6,329,756 _RS28535 QEN71_RS28540: QEN71_RS28540 - hypothetical protein, at 6,329,753 to 6,329,950 _RS28540 QEN71_RS28545: QEN71_RS28545 - YbfB/YjiJ family MFS transporter, at 6,330,216 to 6,331,391 _RS28545 QEN71_RS28550: QEN71_RS28550 - diguanylate cyclase, at 6,331,739 to 6,333,349 _RS28550 QEN71_RS28555: QEN71_RS28555 - GGDEF domain-containing protein, at 6,333,628 to 6,334,578 _RS28555
Group Condition QEN71_RS28535 QEN71_RS28540 QEN71_RS28545 QEN71_RS28550 QEN71_RS28555
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. -0.0 -0.2 N.D.
carbon source Fumaric (C) -0.4 N.D. -0.0 -0.1 N.D.
carbon source casaminos (C) -0.3 N.D. -0.2 +0.0 N.D.
supernatant Filtered_supernatant_MT71_in_LB -0.2 N.D. -0.1 -0.1 N.D.
carbon source D-Glucose (C) -0.3 N.D. -0.0 -0.1 N.D.
carbon source casaminos (C) -0.2 N.D. -0.1 -0.0 N.D.
carbon source succinate (C) -0.2 N.D. -0.0 -0.2 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 N.D. +0.2 -0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. +0.1 +0.0 N.D.
carbon source D-Sorbitol (C) -0.3 N.D. +0.0 +0.0 N.D.
stress LB_noSalt with Zinc 0.5 mM -0.2 N.D. -0.1 +0.1 N.D.
carbon source L-Histidine (C) +0.2 N.D. -0.1 -0.1 N.D.
carbon source D-Sorbitol (C) -0.1 N.D. +0.1 -0.1 N.D.
carbon source L-Leucine (C) -0.2 N.D. +0.1 +0.1 N.D.
stress LB_noSalt with Zinc 0.5 mM +0.2 N.D. -0.1 -0.0 N.D.
motility Motility_inner_sample +0.1 N.D. +0.1 -0.1 N.D.
motility Motility_inner_sample +0.1 N.D. +0.3 -0.2 N.D.
stress LB_noSalt with Chloride 200 mM -0.1 N.D. +0.1 +0.2 N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. +0.0 -0.2 N.D.
supernatant Filtered_supernatant_MT81_in_LB +0.3 N.D. +0.0 -0.0 N.D.
carbon source D,L-Lactate (C) +0.2 N.D. +0.1 +0.0 N.D.
motility Motility_inner_sample +0.0 N.D. +0.2 +0.1 N.D.
motility Motility_outer_sample_with_outgrowth +0.1 N.D. +0.1 +0.2 N.D.
motility Motility_inner_sample_with_outgrowth +0.1 N.D. +0.1 +0.1 N.D.
motility Motility_inner_sample_with_outgrowth -0.0 N.D. +0.2 +0.2 N.D.
supernatant Filtered_supernatant_MT183_in_LB +0.3 N.D. +0.1 -0.0 N.D.
motility Motility_outer_sample_with_outgrowth +0.2 N.D. +0.1 +0.2 N.D.
motility Motility_outer_sample_with_outgrowth +0.2 N.D. +0.1 +0.2 N.D.
motility Motility_outer_sample_with_outgrowth +0.2 N.D. +0.1 +0.2 N.D.
motility Motility_outer_sample +0.2 N.D. +0.1 +0.2 N.D.
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QEN71_RS28535
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QEN71_RS28540
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QEN71_RS28550
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QEN71_RS28555
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