Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS28420 and QEN71_RS28425 are separated by 17 nucleotidesQEN71_RS28425 and QEN71_RS28430 are separated by 248 nucleotidesQEN71_RS28430 and QEN71_RS28435 are separated by 83 nucleotidesQEN71_RS28435 and QEN71_RS28440 are separated by 153 nucleotides QEN71_RS28420: QEN71_RS28420 - DUF1835 domain-containing protein, at 6,303,427 to 6,304,242 _RS28420 QEN71_RS28425: QEN71_RS28425 - TetR/AcrR family transcriptional regulator, at 6,304,260 to 6,304,889 _RS28425 QEN71_RS28430: QEN71_RS28430 - GNAT family N-acetyltransferase, at 6,305,138 to 6,305,803 _RS28430 QEN71_RS28435: QEN71_RS28435 - Lrp/AsnC family transcriptional regulator, at 6,305,887 to 6,306,402 _RS28435 QEN71_RS28440: QEN71_RS28440 - 4-hydroxyphenylpyruvate dioxygenase, at 6,306,556 to 6,307,653 _RS28440
Group Condition QEN71_RS28420 QEN71_RS28425 QEN71_RS28430 QEN71_RS28435 QEN71_RS28440
carbon source D-Sorbitol (C) -1.3 -1.1 +0.1 -0.1 -0.1
carbon source D-Sorbitol (C) -0.8 -0.8 -0.0 +0.1 -0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.0 +0.0 -0.2 +0.1
carbon source D,L-Malic Acid (C) -1.2 -0.2 +0.1 +0.1 -0.1
carbon source D-Fructose (C) -0.6 -0.6 -0.0 +0.1 +0.0
carbon source D,L-Malic Acid (C) -0.6 -0.3 -0.0 -0.1 -0.1
carbon source L-Rhamnose (C) -1.1 -0.2 +0.2 +0.0 -0.1
carbon source L-Rhamnose (C) -0.6 -0.2 +0.1 -0.2 -0.1
carbon source Fumaric (C) -0.7 -0.1 -0.1 +0.0 -0.0
carbon source D-Fructose (C) -0.4 -0.6 +0.1 +0.1 -0.2
carbon source succinate (C) -0.6 -0.3 -0.0 +0.1 +0.0
carbon source L-Aspartic Acid (C) -0.6 -0.3 +0.0 +0.1 +0.0
carbon source L-Leucine (C) +0.1 -0.8 -0.0 -0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.8 -0.2 +0.1 +0.0
carbon source D-Xylose (C) -0.1 -0.5 +0.2 -0.2 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -1.1 -0.0 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.9 -0.0 +0.2 +0.1
carbon source L-Histidine (C) -0.1 -0.5 +0.0 +0.2 -0.1
carbon source L-Leucine (C) +0.4 -0.7 -0.1 +0.0 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.4 -0.1 +0.3 -0.1
motility Motility_inner_sample_with_outgrowth +0.2 -0.6 +0.0 +0.3 +0.1
carbon source D-Glucose (C) +0.7 -0.5 +0.1 +0.1 -0.2
supernatant Filtered_supernatant_MT80_in_LB +0.6 -0.2 -0.0 +0.1 -0.1
motility Motility_outer_sample_with_outgrowth +0.3 -0.1 -0.2 +0.3 +0.2
stress LB_noSalt with Zinc 0.5 mM +0.6 -0.1 -0.1 +0.2 -0.0
motility Motility_outer_sample_with_outgrowth +0.7 -0.2 -0.2 +0.3 +0.1
motility Motility_inner_sample +0.6 -0.2 +0.0 +0.3 +0.1
motility Motility_outer_sample_with_outgrowth +0.8 -0.0 -0.2 +0.2 +0.0
motility Motility_inner_sample +0.8 -0.4 +0.0 +0.3 -0.0
motility Motility_outer_sample +0.8 -0.1 -0.0 +0.2 +0.1
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