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Protein
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Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS28100 and QEN71_RS28105 are separated by 126 nucleotides
QEN71_RS28105 and QEN71_RS28110 are separated by 279 nucleotides
QEN71_RS28110 and QEN71_RS28115 are separated by 247 nucleotides
QEN71_RS28115 and QEN71_RS28120 are separated by 126 nucleotides
QEN71_RS28100: QEN71_RS28100 - cytochrome c biogenesis protein ResB, at 6,248,914 to 6,251,139
_RS28100
QEN71_RS28105: QEN71_RS28105 - c-type cytochrome, at 6,251,266 to 6,251,919
_RS28105
QEN71_RS28110: QEN71_RS28110 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 6,252,199 to 6,252,864
_RS28110
QEN71_RS28115: QEN71_RS28115 - porphobilinogen synthase, at 6,253,112 to 6,254,110
_RS28115
QEN71_RS28120: QEN71_RS28120 - protein-disulfide reductase DsbD, at 6,254,237 to 6,256,090
_RS28120
Group
Condition
QEN71
_RS28100
QEN71
_RS28105
QEN71
_RS28110
QEN71
_RS28115
QEN71
_RS28120
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
-2.9
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
-2.9
N.D.
N.D.
N.D.
coculture
Psabiae_ML3b with MT80
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-2.8
N.D.
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_outer_sample
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_outer_sample
N.D.
-2.8
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-2.7
N.D.
N.D.
N.D.
coculture
Psabiae_ML3b with MT81
N.D.
-2.7
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-2.7
N.D.
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-2.7
N.D.
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-2.7
N.D.
N.D.
N.D.
stress
LB_noSalt with Chloride 200 mM
N.D.
-2.7
N.D.
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-2.7
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-2.5
N.D.
N.D.
N.D.
stress
LB_noSalt with Zinc 0.5 mM
N.D.
-2.4
N.D.
N.D.
N.D.
supernatant
Filtered_supernatant_MT183_in_LB
N.D.
-2.3
N.D.
N.D.
N.D.
stress
LB_noSalt with Chloride 200 mM
N.D.
-2.3
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-2.0
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-1.9
N.D.
N.D.
N.D.
stress
LB_noSalt with Zinc 0.5 mM
N.D.
-1.7
N.D.
N.D.
N.D.
carbon source
D-Sorbitol (C)
N.D.
-1.6
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-1.6
N.D.
N.D.
N.D.
carbon source
D-Sorbitol (C)
N.D.
-1.6
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-1.5
N.D.
N.D.
N.D.
carbon source
L-Leucine (C)
N.D.
-1.5
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-1.5
N.D.
N.D.
N.D.
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