Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS27975 and QEN71_RS27980 are separated by 16 nucleotidesQEN71_RS27980 and QEN71_RS27985 are separated by 403 nucleotidesQEN71_RS27985 and QEN71_RS27990 are separated by 16 nucleotidesQEN71_RS27990 and QEN71_RS27995 are separated by 179 nucleotides QEN71_RS27975: QEN71_RS27975 - hypothetical protein, at 6,219,669 to 6,219,878 _RS27975 QEN71_RS27980: QEN71_RS27980 - hypothetical protein, at 6,219,895 to 6,220,086 _RS27980 QEN71_RS27985: QEN71_RS27985 - response regulator, at 6,220,490 to 6,221,227 _RS27985 QEN71_RS27990: QEN71_RS27990 - ATP-binding protein, at 6,221,244 to 6,222,554 _RS27990 QEN71_RS27995: QEN71_RS27995 - tyrosine-protein phosphatase, at 6,222,734 to 6,223,699 _RS27995
Group Condition QEN71_RS27975 QEN71_RS27980 QEN71_RS27985 QEN71_RS27990 QEN71_RS27995
carbon source casaminos (C) N.D. N.D. +0.1 -0.2 -0.1
motility Motility_outer_sample_with_outgrowth N.D. N.D. -0.0 -0.3 +0.2
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.1 -0.3 +0.1
carbon source casaminos (C) N.D. N.D. +0.1 -0.2 +0.1
stress LB_noSalt with Zinc 0.5 mM N.D. N.D. +0.2 -0.1 -0.1
stress LB_noSalt with Chloride 200 mM N.D. N.D. -0.1 +0.3 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 -0.2 +0.2
carbon source D,L-Lactate (C) N.D. N.D. -0.2 +0.4 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.2 -0.2 +0.2
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.3 -0.1 +0.1
motility Motility_inner_sample N.D. N.D. -0.1 +0.1 +0.3
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.2 -0.2 +0.3
carbon source D,L-Malic Acid (C) N.D. N.D. -0.0 +0.4 -0.0
carbon source L-Histidine (C) N.D. N.D. -0.1 +0.4 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.0 +0.4 +0.0
carbon source Fumaric (C) N.D. N.D. +0.2 +0.2 +0.1
carbon source L-Leucine (C) N.D. N.D. +0.1 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.1 +0.1 +0.3
motility Motility_inner_sample_with_outgrowth N.D. N.D. +0.3 +0.1 +0.1
motility Motility_inner_sample_with_outgrowth N.D. N.D. +0.4 -0.1 +0.2
motility Motility_inner_sample N.D. N.D. +0.2 +0.1 +0.2
carbon source L-Glutamic (C) N.D. N.D. +0.0 +0.3 +0.2
coculture Psabiae_ML3b with MT80 N.D. N.D. +0.1 +0.3 +0.1
carbon source L-Rhamnose (C) N.D. N.D. +0.1 +0.5 -0.1
motility Motility_outer_sample N.D. N.D. +0.2 +0.2 +0.2
motility Motility_inner_sample N.D. N.D. +0.2 +0.3 +0.1
carbon source D-Sorbitol (C) N.D. N.D. +0.4 +0.4 -0.1
coculture Psabiae_ML3b with MT81 N.D. N.D. +0.1 +0.5 +0.1
carbon source D-Xylose (C) N.D. N.D. +0.1 +0.5 +0.4
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.6 +0.8 +0.2
remove
QEN71_RS27975
plot		 remove
QEN71_RS27980
plot		 remove
QEN71_RS27985		 remove
QEN71_RS27990
plot		 remove
QEN71_RS27995
plot