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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS27920 and QEN71_RS27925 are separated by 86 nucleotides
QEN71_RS27925 and QEN71_RS27930 overlap by 4 nucleotides
QEN71_RS27930 and QEN71_RS27935 are separated by 42 nucleotides
QEN71_RS27935 and QEN71_RS27940 are separated by 10 nucleotides
QEN71_RS27920: QEN71_RS27920 - ABC transporter ATP-binding protein, at 6,208,618 to 6,209,439
_RS27920
QEN71_RS27925: QEN71_RS27925 - thiamine phosphate synthase, at 6,209,526 to 6,210,641
_RS27925
QEN71_RS27930: QEN71_RS27930 - thiazole synthase, at 6,210,638 to 6,211,462
_RS27930
QEN71_RS27935: QEN71_RS27935 - sulfur carrier protein ThiS, at 6,211,505 to 6,211,702
_RS27935
QEN71_RS27940: QEN71_RS27940 - FAD-dependent oxidoreductase, at 6,211,713 to 6,212,861
_RS27940
Group
Condition
QEN71
_RS27920
QEN71
_RS27925
QEN71
_RS27930
QEN71
_RS27935
QEN71
_RS27940
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.4
N.D.
N.D.
N.D.
-4.0
carbon source
D-Xylose (C)
-2.5
N.D.
N.D.
N.D.
-3.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.4
N.D.
N.D.
N.D.
-3.0
motility
Motility_outer_sample_with_outgrowth
-3.2
N.D.
N.D.
N.D.
-1.9
motility
Motility_outer_sample_with_outgrowth
-3.2
N.D.
N.D.
N.D.
-1.8
motility
Motility_outer_sample
-3.2
N.D.
N.D.
N.D.
-1.6
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.9
N.D.
N.D.
N.D.
-1.7
motility
Motility_outer_sample_with_outgrowth
-3.1
N.D.
N.D.
N.D.
-1.5
motility
Motility_outer_sample_with_outgrowth
-3.1
N.D.
N.D.
N.D.
-1.4
carbon source
D-Sorbitol (C)
-2.6
N.D.
N.D.
N.D.
-1.9
carbon source
D-Sorbitol (C)
-2.1
N.D.
N.D.
N.D.
-2.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.3
N.D.
N.D.
N.D.
-1.9
motility
Motility_outer_sample
-3.2
N.D.
N.D.
N.D.
-0.8
carbon source
D-Glucose (C)
-2.5
N.D.
N.D.
N.D.
-1.4
carbon source
D-Fructose (C)
-2.7
N.D.
N.D.
N.D.
-1.2
carbon source
L-Histidine (C)
-2.6
N.D.
N.D.
N.D.
-1.1
carbon source
L-Rhamnose (C)
-1.8
N.D.
N.D.
N.D.
-1.8
motility
Motility_inner_sample
-2.9
N.D.
N.D.
N.D.
-0.7
motility
Motility_inner_sample_with_outgrowth
-3.0
N.D.
N.D.
N.D.
-0.4
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.5
N.D.
N.D.
N.D.
-0.8
carbon source
D-Glucose (C)
-2.0
N.D.
N.D.
N.D.
-1.4
motility
Motility_inner_sample
-2.9
N.D.
N.D.
N.D.
-0.5
motility
Motility_inner_sample_with_outgrowth
-3.3
N.D.
N.D.
N.D.
-0.0
motility
Motility_inner_sample
-2.8
N.D.
N.D.
N.D.
-0.3
carbon source
L-Rhamnose (C)
-1.9
N.D.
N.D.
N.D.
-1.3
carbon source
L-Histidine (C)
-2.3
N.D.
N.D.
N.D.
-0.8
carbon source
D-Fructose (C)
-2.3
N.D.
N.D.
N.D.
-0.6
motility
Motility_inner_sample
-2.9
N.D.
N.D.
N.D.
+0.1
carbon source
L-Leucine (C)
-1.3
N.D.
N.D.
N.D.
-1.5
stress
LB_noSalt with Cobalt chloride 0.25 mM
-2.8
N.D.
N.D.
N.D.
+0.1
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