Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS27290 and QEN71_RS27295 are separated by 48 nucleotidesQEN71_RS27295 and QEN71_RS27300 are separated by 179 nucleotidesQEN71_RS27300 and QEN71_RS27305 are separated by 96 nucleotidesQEN71_RS27305 and QEN71_RS27310 overlap by 4 nucleotides QEN71_RS27290: QEN71_RS27290 - polyprenyl synthetase family protein, at 6,082,534 to 6,083,526 _RS27290 QEN71_RS27295: QEN71_RS27295 - tRNA-Pro, at 6,083,575 to 6,083,651 _RS27295 QEN71_RS27300: QEN71_RS27300 - HlyC/CorC family transporter, at 6,083,831 to 6,085,135 _RS27300 QEN71_RS27305: QEN71_RS27305 - ATPase, T2SS/T4P/T4SS family, at 6,085,232 to 6,086,485 _RS27305 QEN71_RS27310: QEN71_RS27310 - type II secretion system F family protein, at 6,086,482 to 6,087,702 _RS27310
Group Condition QEN71_RS27290 QEN71_RS27295 QEN71_RS27300 QEN71_RS27305 QEN71_RS27310
carbon source L-Glutamic (C) N.D. N.D. -0.3 -0.2 -0.1
motility Motility_outer_sample_with_outgrowth N.D. N.D. -0.5 +0.0 -0.0
carbon source D-Xylose (C) N.D. N.D. -0.4 -0.0 -0.1
carbon source Fumaric (C) N.D. N.D. -0.3 -0.2 +0.0
carbon source L-Histidine (C) N.D. N.D. -0.3 -0.1 -0.0
motility Motility_outer_sample_with_outgrowth N.D. N.D. -0.5 +0.1 -0.0
carbon source D-Glucose (C) N.D. N.D. -0.2 -0.2 +0.0
carbon source casaminos (C) N.D. N.D. -0.3 -0.0 -0.1
carbon source D,L-Lactate (C) N.D. N.D. -0.1 -0.2 -0.1
supernatant Filtered_supernatant_MT81_in_LB N.D. N.D. -0.2 -0.1 -0.0
carbon source D-Fructose (C) N.D. N.D. -0.2 -0.0 -0.1
motility Motility_outer_sample N.D. N.D. -0.5 -0.1 +0.2
carbon source L-Glutamic (C) N.D. N.D. -0.1 -0.2 +0.0
coculture Psabiae_ML3b with MT81 N.D. N.D. -0.3 +0.1 -0.1
carbon source L-Leucine (C) N.D. N.D. -0.3 -0.1 +0.1
supernatant Filtered_supernatant_MT71_in_LB N.D. N.D. -0.2 -0.2 +0.0
carbon source L-Histidine (C) N.D. N.D. -0.4 -0.0 +0.1
carbon source L-Aspartic Acid (C) N.D. N.D. -0.2 +0.1 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. N.D. -0.3 -0.0 +0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.0 -0.3 +0.0
motility Motility_outer_sample N.D. N.D. -0.3 +0.0 +0.2
motility Motility_inner_sample N.D. N.D. -0.4 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.4 -0.1 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.3 +0.0 +0.2
motility Motility_inner_sample_with_outgrowth N.D. N.D. -0.2 +0.1 +0.1
carbon source L-Rhamnose (C) N.D. N.D. -0.2 +0.3 -0.0
stress LB_noSalt with Chloride 200 mM N.D. N.D. +0.4 +0.2 -0.0
stress LB_noSalt with Zinc 0.5 mM N.D. N.D. +0.6 +0.0 -0.0
stress LB_noSalt with Zinc 0.5 mM N.D. N.D. +0.4 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.4 +0.2 +0.2
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