Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS27135 and QEN71_RS27140 are separated by 140 nucleotidesQEN71_RS27140 and QEN71_RS27145 overlap by 4 nucleotidesQEN71_RS27145 and QEN71_RS27150 are separated by 204 nucleotidesQEN71_RS27150 and QEN71_RS27155 are separated by 26 nucleotides QEN71_RS27135: QEN71_RS27135 - RNB domain-containing ribonuclease, at 6,050,958 to 6,053,048 _RS27135 QEN71_RS27140: QEN71_RS27140 - YqiA/YcfP family alpha/beta fold hydrolase, at 6,053,189 to 6,053,791 _RS27140 QEN71_RS27145: QEN71_RS27145 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 6,053,788 to 6,055,197 _RS27145 QEN71_RS27150: QEN71_RS27150 - UDP-N-acetylmuramate--alanine ligase, at 6,055,402 to 6,056,055 _RS27150 QEN71_RS27155: QEN71_RS27155 - TlpA disulfide reductase family protein, at 6,056,082 to 6,056,630 _RS27155
Group Condition QEN71_RS27135 QEN71_RS27140 QEN71_RS27145 QEN71_RS27150 QEN71_RS27155
motility Motility_outer_sample N.D. -0.6 -2.7 +0.1 -1.6
motility Motility_outer_sample_with_outgrowth N.D. -0.7 -2.4 -0.0 -1.5
motility Motility_outer_sample_with_outgrowth N.D. -0.7 -2.2 +0.0 -1.6
motility Motility_outer_sample N.D. -0.4 -2.3 +0.1 -1.7
motility Motility_outer_sample_with_outgrowth N.D. -0.7 -2.3 +0.0 -1.1
motility Motility_outer_sample_with_outgrowth N.D. -0.4 -2.3 +0.0 -1.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.3 -0.0 -0.3 -2.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 +0.1 -0.1 -2.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 -0.2 +0.1 -2.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.3 -0.1 +0.2 -2.2
carbon source D-Xylose (C) N.D. -0.4 +0.1 -0.4 -1.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.0 +0.2 +0.2 -2.1
motility Motility_inner_sample N.D. -0.2 -0.5 -0.0 -0.7
motility Motility_inner_sample N.D. -0.2 -0.6 -0.1 -0.5
motility Motility_inner_sample N.D. -0.2 -0.3 +0.1 -1.1
carbon source D,L-Lactate (C) N.D. -0.3 +0.1 +0.0 -0.9
motility Motility_inner_sample_with_outgrowth N.D. -0.1 -0.4 +0.3 -0.7
carbon source L-Rhamnose (C) N.D. +0.0 +0.4 -0.3 -0.9
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.1 +0.3 -0.4 -0.7
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.0 +0.3 -0.4 -0.6
carbon source D-Sorbitol (C) N.D. +0.1 +0.4 -0.1 -1.1
carbon source L-Leucine (C) N.D. +0.2 +0.2 -0.1 -0.9
carbon source L-Rhamnose (C) N.D. +0.1 +0.4 -0.2 -0.9
carbon source L-Leucine (C) N.D. +0.2 +0.3 -0.0 -1.0
carbon source D-Sorbitol (C) N.D. +0.1 +0.6 -0.2 -1.0
carbon source L-Histidine (C) N.D. +0.3 +0.2 -0.1 -0.9
carbon source L-Histidine (C) N.D. +0.2 +0.3 -0.1 -0.8
carbon source D-Fructose (C) N.D. +0.0 +0.3 +0.0 -0.7
stress LB_noSalt with Zinc 0.5 mM N.D. -0.2 -0.9 +0.3 +0.5
stress LB_noSalt with Zinc 0.5 mM N.D. -0.3 -0.8 +0.3 +0.6
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