Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS27040 and QEN71_RS27045 are separated by 250 nucleotidesQEN71_RS27045 and QEN71_RS27050 overlap by 11 nucleotidesQEN71_RS27050 and QEN71_RS27055 are separated by 33 nucleotidesQEN71_RS27055 and QEN71_RS27060 are separated by 8 nucleotides QEN71_RS27040: QEN71_RS27040 - NADP-dependent malic enzyme, at 6,031,495 to 6,033,789 _RS27040 QEN71_RS27045: QEN71_RS27045 - thiamine-phosphate kinase, at 6,034,040 to 6,035,035 _RS27045 QEN71_RS27050: QEN71_RS27050 - phosphatidylglycerophosphatase A, at 6,035,025 to 6,035,666 _RS27050 QEN71_RS27055: QEN71_RS27055 - CinA family protein, at 6,035,700 to 6,036,200 _RS27055 QEN71_RS27060: QEN71_RS27060 - cupin domain-containing protein, at 6,036,209 to 6,036,721 _RS27060
Group Condition QEN71_RS27040 QEN71_RS27045 QEN71_RS27050 QEN71_RS27055 QEN71_RS27060
carbon source Fumaric (C) N.D. N.D. N.D. -0.4 -0.0
carbon source Fumaric (C) N.D. N.D. N.D. -0.4 -0.1
carbon source succinate (C) N.D. N.D. N.D. -0.4 -0.0
carbon source D-Sorbitol (C) N.D. N.D. N.D. -0.4 -0.0
carbon source D,L-Lactate (C) N.D. N.D. N.D. -0.4 +0.1
carbon source succinate (C) N.D. N.D. N.D. -0.4 +0.0
carbon source L-Rhamnose (C) N.D. N.D. N.D. -0.2 -0.1
carbon source L-Aspartic Acid (C) N.D. N.D. N.D. -0.5 +0.2
carbon source D-Fructose (C) N.D. N.D. N.D. -0.2 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -0.3 +0.0
motility Motility_inner_sample N.D. N.D. N.D. -0.2 -0.1
carbon source D-Glucose (C) N.D. N.D. N.D. -0.3 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -0.3 +0.2
carbon source L-Aspartic Acid (C) N.D. N.D. N.D. -0.2 +0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. N.D. -0.2 +0.1
motility Motility_outer_sample_with_outgrowth N.D. N.D. N.D. -0.2 +0.1
motility Motility_inner_sample N.D. N.D. N.D. -0.2 +0.1
carbon source casaminos (C) N.D. N.D. N.D. -0.2 +0.1
stress LB_noSalt with Chloride 200 mM N.D. N.D. N.D. -0.1 +0.2
carbon source casaminos (C) N.D. N.D. N.D. -0.2 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -0.1 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -0.1 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. N.D. -0.1 +0.2
carbon source D-Sorbitol (C) N.D. N.D. N.D. +0.2 -0.1
motility Motility_outer_sample_with_outgrowth N.D. N.D. N.D. +0.1 +0.2
motility Motility_inner_sample_with_outgrowth N.D. N.D. N.D. +0.1 +0.1
coculture Psabiae_ML3b with MT81 N.D. N.D. N.D. +0.2 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. N.D. N.D. +0.1 +0.1
motility Motility_outer_sample N.D. N.D. N.D. +0.1 +0.2
motility Motility_outer_sample N.D. N.D. N.D. +0.3 +0.2
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