Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS26985 and QEN71_RS26990 are separated by 30 nucleotidesQEN71_RS26990 and QEN71_RS26995 are separated by 128 nucleotidesQEN71_RS26995 and QEN71_RS27000 are separated by 252 nucleotidesQEN71_RS27000 and QEN71_RS27005 are separated by 186 nucleotides QEN71_RS26985: QEN71_RS26985 - ureidoglycolate lyase, at 6,018,110 to 6,018,622 _RS26985 QEN71_RS26990: QEN71_RS26990 - allantoicase, at 6,018,653 to 6,019,663 _RS26990 QEN71_RS26995: QEN71_RS26995 - C4-dicarboxylate transporter DctA, at 6,019,792 to 6,021,117 _RS26995 QEN71_RS27000: QEN71_RS27000 - FadR/GntR family transcriptional regulator, at 6,021,370 to 6,022,062 _RS27000 QEN71_RS27005: QEN71_RS27005 - type I glyceraldehyde-3-phosphate dehydrogenase, at 6,022,249 to 6,023,259 _RS27005
Group Condition QEN71_RS26985 QEN71_RS26990 QEN71_RS26995 QEN71_RS27000 QEN71_RS27005
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.2 +0.2 -3.1 -4.9
motility Motility_outer_sample_with_outgrowth -0.2 +0.1 +0.1 -0.0 -6.6
motility Motility_outer_sample_with_outgrowth -0.2 +0.0 +0.0 -0.0 -6.4
motility Motility_outer_sample_with_outgrowth -0.2 +0.1 +0.1 +0.1 -6.2
carbon source casaminos (C) -0.3 -0.1 +0.2 +0.1 -6.0
carbon source D,L-Malic Acid (C) -0.1 -0.1 +0.2 -0.1 -5.7
carbon source succinate (C) -0.2 +0.0 +0.1 -0.1 -5.1
carbon source D-Xylose (C) -0.1 +0.0 +0.1 -0.0 -5.0
carbon source casaminos (C) -0.1 +0.0 +0.2 +0.0 -5.1
carbon source L-Aspartic Acid (C) +0.0 +0.0 +0.1 -0.1 -4.8
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.1 +0.2 -0.5 -4.4
carbon source L-Histidine (C) +0.0 -0.0 +0.1 -0.2 -4.6
carbon source L-Aspartic Acid (C) -0.2 +0.0 +0.2 +0.0 -4.7
carbon source D-Sorbitol (C) -0.3 +0.1 +0.3 -0.1 -4.5
carbon source D-Sorbitol (C) +0.2 +0.1 +0.2 +0.0 -4.9
motility Motility_outer_sample -0.2 +0.2 +0.1 +0.2 -4.7
carbon source L-Histidine (C) -0.2 +0.1 +0.1 -0.2 -4.1
carbon source L-Leucine (C) -0.3 -0.2 +0.2 -0.2 -3.8
carbon source succinate (C) +0.0 +0.0 +0.1 +0.0 -4.4
motility Motility_outer_sample -0.1 -0.1 +0.1 +0.1 -4.3
motility Motility_inner_sample_with_outgrowth -0.3 -0.0 +0.1 -0.2 -3.9
motility Motility_inner_sample_with_outgrowth -0.2 -0.1 +0.1 -0.2 -3.7
carbon source D,L-Lactate (C) -0.2 -0.1 +0.2 +0.0 -3.9
supernatant Filtered_supernatant_MT80_in_LB -0.3 -0.1 +0.2 -0.0 -3.7
motility Motility_outer_sample_with_outgrowth +0.1 +0.1 +0.2 +0.1 -4.3
carbon source Fumaric (C) -0.0 +0.5 +0.3 +0.1 -4.7
carbon source L-Rhamnose (C) -0.1 +0.2 +0.2 -0.2 -3.7
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.2 +0.3 +0.9 -4.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.3 +0.0 +1.1 -4.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.3 +0.6 +0.2 +2.7 -3.6
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