Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS26420 and QEN71_RS26425 are separated by 275 nucleotidesQEN71_RS26425 and QEN71_RS26430 are separated by 64 nucleotidesQEN71_RS26430 and QEN71_RS26435 are separated by 201 nucleotidesQEN71_RS26435 and QEN71_RS26440 are separated by 34 nucleotides QEN71_RS26420: QEN71_RS26420 - hypothetical protein, at 5,891,367 to 5,891,801 _RS26420 QEN71_RS26425: QEN71_RS26425 - mechanosensitive ion channel family protein, at 5,892,077 to 5,892,889 _RS26425 QEN71_RS26430: QEN71_RS26430 - DedA family protein, at 5,892,954 to 5,893,643 _RS26430 QEN71_RS26435: QEN71_RS26435 - DNA mismatch repair endonuclease MutL, at 5,893,845 to 5,895,914 _RS26435 QEN71_RS26440: QEN71_RS26440 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 5,895,949 to 5,896,902 _RS26440
Group Condition QEN71_RS26420 QEN71_RS26425 QEN71_RS26430 QEN71_RS26435 QEN71_RS26440
motility Motility_inner_sample -0.1 +0.0 -2.1 -0.1 N.D.
motility Motility_inner_sample_with_outgrowth -0.3 +0.1 -1.6 -0.1 N.D.
motility Motility_outer_sample_with_outgrowth -0.1 -0.1 -1.4 -0.2 N.D.
motility Motility_outer_sample +0.2 +0.0 -1.8 -0.2 N.D.
coculture Psabiae_ML3b with MT80 -0.1 -0.1 -1.5 +0.1 N.D.
motility Motility_outer_sample_with_outgrowth -0.1 -0.0 -1.1 -0.2 N.D.
motility Motility_outer_sample_with_outgrowth -0.1 +0.2 -0.9 -0.3 N.D.
motility Motility_inner_sample_with_outgrowth +0.6 +0.2 -1.5 -0.1 N.D.
motility Motility_outer_sample_with_outgrowth +0.4 +0.1 -0.5 -0.3 N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 +0.0 +0.9 +0.0 N.D.
carbon source casaminos (C) -0.3 +0.2 +0.7 -0.1 N.D.
carbon source Fumaric (C) -0.3 +0.1 +1.0 -0.0 N.D.
carbon source D,L-Lactate (C) -0.1 +0.0 +1.1 -0.2 N.D.
carbon source L-Histidine (C) -0.3 +0.1 +1.2 -0.0 N.D.
carbon source D-Sorbitol (C) -0.2 +0.1 +1.1 -0.0 N.D.
stress LB_noSalt with Chloride 200 mM -0.2 -0.2 +1.5 +0.1 N.D.
carbon source succinate (C) +0.2 -0.1 +1.1 -0.1 N.D.
carbon source L-Leucine (C) -0.0 +0.2 +1.0 -0.0 N.D.
carbon source succinate (C) -0.2 +0.1 +1.3 +0.0 N.D.
carbon source D-Xylose (C) -0.0 +0.2 +1.1 +0.0 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.3 +1.2 -0.1 N.D.
carbon source D,L-Lactate (C) +0.2 -0.1 +1.0 +0.2 N.D.
stress LB_noSalt with Chloride 200 mM +0.0 +0.1 +1.3 -0.0 N.D.
stress LB_noSalt with Chloride 200 mM +0.2 -0.1 +1.2 -0.0 N.D.
carbon source L-Leucine (C) -0.1 +0.2 +1.3 -0.1 N.D.
carbon source Fumaric (C) +0.2 +0.1 +1.1 +0.1 N.D.
carbon source D-Sorbitol (C) +0.1 +0.2 +1.3 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.1 +1.4 -0.1 N.D.
carbon source L-Histidine (C) +0.1 +0.2 +1.4 -0.0 N.D.
carbon source L-Rhamnose (C) +0.0 -0.1 +1.8 +0.1 N.D.
remove
QEN71_RS26420
plot		 remove
QEN71_RS26425
plot		 remove
QEN71_RS26430		 remove
QEN71_RS26435
plot		 remove
QEN71_RS26440
plot