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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS25415 and QEN71_RS25420 are separated by 247 nucleotides
QEN71_RS25420 and QEN71_RS25425 overlap by 4 nucleotides
QEN71_RS25425 and QEN71_RS25430 are separated by 30 nucleotides
QEN71_RS25430 and QEN71_RS25435 are separated by 11 nucleotides
QEN71_RS25415: QEN71_RS25415 - phosphomannomutase/phosphoglucomutase, at 5,652,837 to 5,654,231
_RS25415
QEN71_RS25420: QEN71_RS25420 - oligosaccharide flippase family protein, at 5,654,479 to 5,655,741
_RS25420
QEN71_RS25425: QEN71_RS25425 - glycosyltransferase, at 5,655,738 to 5,656,586
_RS25425
QEN71_RS25430: QEN71_RS25430 - glycosyltransferase family 4 protein, at 5,656,617 to 5,657,789
_RS25430
QEN71_RS25435: QEN71_RS25435 - UDP-glucose 4-epimerase GalE, at 5,657,801 to 5,658,823
_RS25435
Group
Condition
QEN71
_RS25415
QEN71
_RS25420
QEN71
_RS25425
QEN71
_RS25430
QEN71
_RS25435
motility
Motility_outer_sample_with_outgrowth
N.D.
-4.2
-3.7
-1.0
-0.9
motility
Motility_outer_sample_with_outgrowth
N.D.
-4.0
-3.4
-0.9
-0.9
motility
Motility_outer_sample_with_outgrowth
N.D.
-3.6
-3.3
-1.4
-0.9
motility
Motility_outer_sample
N.D.
-3.6
-3.9
-0.8
-0.7
motility
Motility_outer_sample
N.D.
-3.6
-3.1
-1.1
-1.0
motility
Motility_outer_sample_with_outgrowth
N.D.
-3.7
-2.6
-1.1
-0.9
stress
LB_noSalt with Chloride 200 mM
N.D.
-3.0
-3.3
-0.9
-0.9
motility
Motility_inner_sample_with_outgrowth
N.D.
-3.5
-1.5
-0.9
-1.1
carbon source
casaminos (C)
N.D.
-2.2
-2.9
-1.1
-0.6
motility
Motility_inner_sample
N.D.
-2.9
-2.1
-0.8
-0.9
carbon source
D,L-Malic Acid (C)
N.D.
-3.5
-2.8
-0.3
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-2.5
-3.5
-0.5
+0.0
motility
Motility_inner_sample_with_outgrowth
N.D.
-3.1
-1.5
-0.8
-1.1
stress
LB_noSalt with Chloride 200 mM
N.D.
-2.8
-2.2
-0.9
-0.6
motility
Motility_inner_sample
N.D.
-2.8
-1.6
-1.1
-1.0
motility
Motility_inner_sample
N.D.
-3.2
-1.4
-0.9
-0.9
carbon source
succinate (C)
N.D.
-3.0
-2.7
-0.3
-0.3
carbon source
casaminos (C)
N.D.
-2.4
-2.4
-0.9
-0.6
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-2.0
-2.8
-0.7
-0.7
carbon source
Fumaric (C)
N.D.
-2.8
-2.8
-0.7
+0.1
supernatant
Filtered_supernatant_MT80_in_LB
N.D.
-2.6
-2.0
-0.7
-0.9
stress
LB_noSalt with Chloride 200 mM
N.D.
-1.9
-2.5
-0.9
-0.8
supernatant
Filtered_supernatant_MT183_in_LB
N.D.
-2.3
-2.2
-0.8
-0.7
carbon source
Fumaric (C)
N.D.
-3.6
-1.6
-0.6
-0.0
supernatant
Filtered_supernatant_MT81_in_LB
N.D.
-2.5
-1.8
-0.8
-0.7
carbon source
D,L-Malic Acid (C)
N.D.
-2.0
-3.2
-0.5
+0.1
carbon source
succinate (C)
N.D.
-2.9
-2.0
-0.6
-0.1
motility
Motility_inner_sample
N.D.
-2.1
-1.6
-0.9
-1.0
stress
LB_noSalt with Zinc 0.5 mM
N.D.
-2.2
-2.1
-0.6
-0.5
stress
LB_noSalt with Chloride 200 mM
N.D.
-2.0
-1.7
-1.0
-0.6
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