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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS24780 and QEN71_RS24785 are separated by 173 nucleotides
QEN71_RS24785 and QEN71_RS24790 are separated by 136 nucleotides
QEN71_RS24790 and QEN71_RS24795 are separated by 306 nucleotides
QEN71_RS24795 and QEN71_RS24800 are separated by 78 nucleotides
QEN71_RS24780: QEN71_RS24780 - hypothetical protein, at 5,512,539 to 5,512,751
_RS24780
QEN71_RS24785: QEN71_RS24785 - hypothetical protein, at 5,512,925 to 5,513,155
_RS24785
QEN71_RS24790: QEN71_RS24790 - sigma-54 dependent transcriptional regulator, at 5,513,292 to 5,514,695
_RS24790
QEN71_RS24795: QEN71_RS24795 - hypothetical protein, at 5,515,002 to 5,515,253
_RS24795
QEN71_RS24800: QEN71_RS24800 - DUF883 family protein, at 5,515,332 to 5,515,649
_RS24800
Group
Condition
QEN71
_RS24780
QEN71
_RS24785
QEN71
_RS24790
QEN71
_RS24795
QEN71
_RS24800
carbon source
succinate (C)
-0.1
+0.2
-0.3
-0.4
-0.2
carbon source
L-Aspartic Acid (C)
-0.1
+0.3
-0.2
-0.3
-0.3
motility
Motility_outer_sample_with_outgrowth
-0.5
-0.1
-0.2
+0.0
+0.4
motility
Motility_outer_sample_with_outgrowth
-0.3
-0.0
-0.2
+0.4
-0.2
motility
Motility_outer_sample_with_outgrowth
-0.2
-0.2
-0.2
+0.1
+0.3
motility
Motility_inner_sample
-0.4
+0.3
-0.0
-0.1
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
+0.1
+0.3
-0.2
+0.2
carbon source
D-Fructose (C)
+0.2
+0.4
+0.1
-0.5
+0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.4
+0.2
-0.2
-0.1
+0.0
carbon source
L-Aspartic Acid (C)
-0.0
+0.1
-0.2
-0.2
+0.5
carbon source
L-Glutamic (C)
-0.1
+0.1
-0.1
-0.1
+0.5
stress
LB_noSalt with Zinc 0.5 mM
-0.1
-0.3
+0.1
+0.2
+0.3
carbon source
D-Sorbitol (C)
-0.0
+0.5
-0.3
+0.3
-0.1
carbon source
L-Leucine (C)
+0.1
+0.0
+0.4
-0.3
+0.2
carbon source
D,L-Malic Acid (C)
+0.2
+0.1
-0.3
+0.2
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.4
+0.1
+0.2
-0.2
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.5
-0.1
+0.2
-0.3
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.5
-0.2
+0.5
-0.1
-0.0
carbon source
Fumaric (C)
+0.5
+0.3
-0.1
+0.0
+0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.1
+0.6
-0.0
-0.0
carbon source
L-Histidine (C)
+0.6
+0.2
+0.3
-0.0
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.4
+0.5
+0.0
+0.2
carbon source
D-Glucose (C)
+0.4
-0.1
+0.3
+0.2
+0.0
carbon source
D-Fructose (C)
+0.1
+0.3
+0.3
+0.5
-0.2
carbon source
L-Leucine (C)
+0.3
-0.0
+0.4
+0.1
+0.2
carbon source
L-Rhamnose (C)
+0.5
+0.3
+0.3
+0.2
-0.2
carbon source
L-Histidine (C)
+0.5
+0.3
+0.2
+0.4
-0.1
carbon source
L-Rhamnose (C)
+0.5
+0.2
+0.5
+0.1
+0.1
carbon source
D-Glucose (C)
+0.7
+0.3
+0.4
-0.1
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.1
+0.3
+0.4
+0.4
+0.4
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QEN71_RS24780
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QEN71_RS24785
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QEN71_RS24790
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QEN71_RS24795
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QEN71_RS24800
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