Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS23650 and QEN71_RS23655 overlap by 11 nucleotidesQEN71_RS23655 and QEN71_RS23660 are separated by 503 nucleotidesQEN71_RS23660 and QEN71_RS23665 are separated by 88 nucleotidesQEN71_RS23665 and QEN71_RS23670 are separated by 180 nucleotides QEN71_RS23650: QEN71_RS23650 - tetratricopeptide repeat protein, at 5,270,653 to 5,274,621 _RS23650 QEN71_RS23655: QEN71_RS23655 - sugar ABC transporter, at 5,274,611 to 5,277,472 _RS23655 QEN71_RS23660: QEN71_RS23660 - AraC family transcriptional regulator, at 5,277,976 to 5,278,791 _RS23660 QEN71_RS23665: QEN71_RS23665 - LysE family transporter, at 5,278,880 to 5,279,530 _RS23665 QEN71_RS23670: QEN71_RS23670 - DUF1328 domain-containing protein, at 5,279,711 to 5,279,872 _RS23670
Group Condition QEN71_RS23650 QEN71_RS23655 QEN71_RS23660 QEN71_RS23665 QEN71_RS23670
carbon source D,L-Lactate (C) +0.1 -0.0 -0.0 -0.3 -0.4
supernatant Filtered_supernatant_MT183_in_LB +0.2 -0.0 -0.0 -0.2 -0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.1 +0.0 -0.3 +0.1
stress LB_noSalt with Chloride 200 mM +0.1 -0.1 +0.1 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 -0.2 -0.0 -0.1
carbon source L-Rhamnose (C) +0.1 -0.1 +0.1 -0.2 -0.1
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 +0.0 -0.1 -0.2
carbon source D,L-Malic Acid (C) +0.1 +0.1 -0.1 -0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.0 -0.0 -0.2 +0.1
coculture Psabiae_ML3b with MT81 +0.2 -0.1 +0.0 +0.0 -0.2
carbon source D-Sorbitol (C) +0.1 -0.0 +0.0 +0.2 -0.2
carbon source L-Leucine (C) +0.2 -0.1 +0.1 -0.1 -0.1
stress LB_noSalt with Chloride 200 mM +0.0 -0.0 +0.1 +0.2 -0.2
carbon source L-Histidine (C) +0.1 +0.1 +0.1 -0.2 +0.0
carbon source D,L-Lactate (C) +0.1 +0.0 +0.3 -0.1 -0.0
carbon source L-Glutamic (C) +0.1 -0.0 +0.1 -0.1 +0.1
motility Motility_inner_sample +0.2 -0.0 +0.0 +0.2 -0.2
carbon source succinate (C) +0.2 -0.1 -0.0 +0.1 -0.1
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 -0.1 +0.1 +0.2
carbon source L-Rhamnose (C) +0.1 +0.1 -0.1 +0.3 -0.0
carbon source D-Xylose (C) +0.1 -0.0 +0.3 -0.1 +0.1
carbon source casaminos (C) +0.2 +0.0 +0.1 +0.1 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 -0.0 +0.1 -0.0 +0.2
carbon source casaminos (C) +0.2 +0.1 +0.2 -0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.1 +0.3 +0.0 -0.0
stress LB_noSalt with Zinc 0.5 mM +0.1 -0.1 +0.0 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.0 +0.3 -0.1 +0.1
motility Motility_inner_sample_with_outgrowth +0.1 -0.0 +0.2 +0.1 +0.2
carbon source L-Aspartic Acid (C) +0.1 +0.1 +0.2 +0.0 +0.1
motility Motility_inner_sample +0.0 +0.3 +0.1 +0.0 +0.1
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