Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS23090 and QEN71_RS23095 are separated by 24 nucleotidesQEN71_RS23095 and QEN71_RS23100 are separated by 165 nucleotidesQEN71_RS23100 and QEN71_RS23105 are separated by 96 nucleotidesQEN71_RS23105 and QEN71_RS23110 overlap by 4 nucleotides QEN71_RS23090: QEN71_RS23090 - tRNA pseudouridine(55) synthase TruB, at 5,133,119 to 5,134,048 _RS23090 QEN71_RS23095: QEN71_RS23095 - 30S ribosome-binding factor RbfA, at 5,134,073 to 5,134,438 _RS23095 QEN71_RS23100: QEN71_RS23100 - translation initiation factor IF-2, at 5,134,604 to 5,137,504 _RS23100 QEN71_RS23105: QEN71_RS23105 - transcription termination factor NusA, at 5,137,601 to 5,139,076 _RS23105 QEN71_RS23110: QEN71_RS23110 - ribosome maturation factor RimP, at 5,139,073 to 5,139,531 _RS23110
Group Condition QEN71_RS23090 QEN71_RS23095 QEN71_RS23100 QEN71_RS23105 QEN71_RS23110
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.2 N.D. N.D. N.D. -0.7
carbon source L-Rhamnose (C) -0.5 N.D. N.D. N.D. -1.1
motility Motility_inner_sample -0.5 N.D. N.D. N.D. -1.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 N.D. N.D. N.D. -0.9
motility Motility_inner_sample -0.4 N.D. N.D. N.D. -1.1
carbon source D-Fructose (C) -0.6 N.D. N.D. N.D. -0.8
carbon source D-Sorbitol (C) -0.2 N.D. N.D. N.D. -1.2
carbon source L-Rhamnose (C) -0.3 N.D. N.D. N.D. -1.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. N.D. N.D. -0.9
motility Motility_inner_sample_with_outgrowth -0.2 N.D. N.D. N.D. -1.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 N.D. N.D. N.D. -0.6
carbon source succinate (C) -0.2 N.D. N.D. N.D. -1.0
coculture Psabiae_ML3b with MT80 -0.3 N.D. N.D. N.D. -0.8
carbon source D-Fructose (C) -0.3 N.D. N.D. N.D. -0.7
carbon source succinate (C) -0.4 N.D. N.D. N.D. -0.6
stress LB_noSalt with Zinc 0.5 mM +0.2 N.D. N.D. N.D. -1.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. N.D. N.D. -0.6
carbon source L-Leucine (C) -0.1 N.D. N.D. N.D. -0.6
carbon source D-Sorbitol (C) -0.1 N.D. N.D. N.D. -0.7
motility Motility_inner_sample_with_outgrowth -0.3 N.D. N.D. N.D. -0.4
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. N.D. N.D. +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. N.D. N.D. +0.5
carbon source D-Xylose (C) -0.6 N.D. N.D. N.D. +0.7
motility Motility_outer_sample_with_outgrowth -0.2 N.D. N.D. N.D. +0.8
stress LB_noSalt with Chloride 200 mM +0.5 N.D. N.D. N.D. +0.2
stress LB_noSalt with Chloride 200 mM +0.2 N.D. N.D. N.D. +0.7
motility Motility_outer_sample_with_outgrowth -0.1 N.D. N.D. N.D. +1.1
motility Motility_outer_sample_with_outgrowth +0.0 N.D. N.D. N.D. +1.0
motility Motility_outer_sample_with_outgrowth -0.0 N.D. N.D. N.D. +1.1
motility Motility_outer_sample +0.2 N.D. N.D. N.D. +0.9
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