Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS22890 and QEN71_RS22895 are separated by 57 nucleotidesQEN71_RS22895 and QEN71_RS22900 are separated by 374 nucleotidesQEN71_RS22900 and QEN71_RS22905 are separated by 612 nucleotidesQEN71_RS22905 and QEN71_RS22910 are separated by 84 nucleotides QEN71_RS22890: QEN71_RS22890 - GNVR domain-containing protein, at 5,084,244 to 5,086,496 _RS22890 QEN71_RS22895: QEN71_RS22895 - polysaccharide biosynthesis/export family protein, at 5,086,554 to 5,087,642 _RS22895 QEN71_RS22900: QEN71_RS22900 - sugar transferase, at 5,088,017 to 5,089,084 _RS22900 QEN71_RS22905: QEN71_RS22905 - ribose-5-phosphate isomerase RpiA, at 5,089,697 to 5,090,392 _RS22905 QEN71_RS22910: QEN71_RS22910 - N-acetylmuramoyl-L-alanine amidase, at 5,090,477 to 5,091,343 _RS22910
Group Condition QEN71_RS22890 QEN71_RS22895 QEN71_RS22900 QEN71_RS22905 QEN71_RS22910
carbon source D,L-Malic Acid (C) -0.1 -0.3 -0.6 N.D. -0.1
carbon source D-Xylose (C) -0.0 -0.3 -0.7 N.D. +0.1
carbon source D-Fructose (C) +0.0 -0.0 -0.7 N.D. -0.0
carbon source D,L-Lactate (C) -0.1 -0.2 -0.4 N.D. +0.1
motility Motility_inner_sample_with_outgrowth -0.1 -0.0 -0.6 N.D. +0.1
carbon source L-Histidine (C) +0.0 -0.1 -0.7 N.D. +0.1
carbon source D-Fructose (C) -0.1 -0.2 -0.4 N.D. +0.1
motility Motility_outer_sample -0.1 +0.1 -0.4 N.D. -0.1
stress LB_noSalt with Chloride 200 mM -0.1 +0.1 -0.5 N.D. -0.1
motility Motility_outer_sample_with_outgrowth +0.0 -0.2 -0.2 N.D. -0.2
motility Motility_inner_sample -0.2 -0.0 -0.4 N.D. +0.1
motility Motility_outer_sample -0.2 +0.1 -0.4 N.D. +0.0
stress LB_noSalt with Chloride 200 mM -0.1 +0.0 -0.4 N.D. +0.1
motility Motility_inner_sample +0.1 -0.0 -0.6 N.D. +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.0 -0.4 N.D. +0.1
carbon source L-Rhamnose (C) +0.2 -0.2 -0.3 N.D. -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 -0.7 N.D. +0.1
supernatant Filtered_supernatant_MT80_in_LB -0.0 -0.1 -0.5 N.D. +0.3
coculture Psabiae_ML3b with MT81 -0.1 +0.2 -0.3 N.D. -0.1
stress LB_noSalt with Chloride 200 mM +0.1 -0.1 -0.4 N.D. +0.1
motility Motility_outer_sample_with_outgrowth +0.2 -0.1 -0.2 N.D. -0.1
stress LB_noSalt with Chloride 200 mM -0.0 +0.1 -0.4 N.D. +0.1
carbon source Fumaric (C) -0.0 +0.1 -0.4 N.D. +0.2
carbon source Fumaric (C) -0.1 +0.2 -0.3 N.D. +0.1
supernatant Filtered_supernatant_MT71_in_LB +0.0 +0.1 -0.4 N.D. +0.2
carbon source succinate (C) -0.0 +0.3 -0.3 N.D. +0.1
carbon source D-Glucose (C) +0.2 +0.1 -0.3 N.D. +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 +0.2 N.D. +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.0 +0.2 N.D. +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 +0.6 +0.2 N.D. -0.0
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