Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS22875 and QEN71_RS22880 are separated by 98 nucleotidesQEN71_RS22880 and QEN71_RS22885 are separated by 331 nucleotidesQEN71_RS22885 and QEN71_RS22890 are separated by 462 nucleotidesQEN71_RS22890 and QEN71_RS22895 are separated by 57 nucleotides QEN71_RS22875: QEN71_RS22875 - cupin-like domain-containing protein, at 5,080,473 to 5,081,465 _RS22875 QEN71_RS22880: QEN71_RS22880 - methyltransferase, TIGR04325 family, at 5,081,564 to 5,082,415 _RS22880 QEN71_RS22885: QEN71_RS22885 - acyltransferase, at 5,082,747 to 5,083,781 _RS22885 QEN71_RS22890: QEN71_RS22890 - GNVR domain-containing protein, at 5,084,244 to 5,086,496 _RS22890 QEN71_RS22895: QEN71_RS22895 - polysaccharide biosynthesis/export family protein, at 5,086,554 to 5,087,642 _RS22895
Group Condition QEN71_RS22875 QEN71_RS22880 QEN71_RS22885 QEN71_RS22890 QEN71_RS22895
carbon source succinate (C) -0.1 +0.1 +0.1 -0.1 -0.4
carbon source D,L-Malic Acid (C) -0.2 +0.0 +0.2 -0.1 -0.3
carbon source D,L-Malic Acid (C) -0.3 -0.2 -0.0 +0.1 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 -0.3 +0.1 +0.0 -0.1
coculture Psabiae_ML3b with MT81 -0.3 +0.1 +0.0 -0.1 +0.2
supernatant Filtered_supernatant_MT81_in_LB -0.4 +0.1 +0.0 -0.1 +0.2
motility Motility_outer_sample_with_outgrowth -0.2 +0.1 -0.2 +0.2 -0.1
carbon source D-Fructose (C) -0.0 +0.3 +0.0 -0.1 -0.2
motility Motility_inner_sample -0.0 -0.3 +0.1 +0.0 +0.2
stress LB_noSalt with Zinc 0.5 mM -0.1 -0.4 +0.1 +0.1 +0.2
carbon source D,L-Lactate (C) +0.0 +0.2 +0.2 -0.1 -0.2
carbon source L-Histidine (C) -0.2 +0.2 +0.2 -0.0 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.0 -0.2 +0.4 +0.0
carbon source L-Glutamic (C) +0.3 -0.1 +0.2 -0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.1 +0.3 +0.1 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM -0.2 +0.2 -0.1 +0.1 +0.2
carbon source L-Rhamnose (C) -0.1 +0.3 +0.1 +0.2 -0.2
motility Motility_outer_sample_with_outgrowth +0.4 +0.2 +0.0 +0.0 -0.2
carbon source L-Aspartic Acid (C) -0.1 +0.3 +0.1 +0.1 -0.0
motility Motility_outer_sample_with_outgrowth -0.1 +0.2 +0.1 +0.2 +0.1
motility Motility_inner_sample_with_outgrowth +0.2 +0.2 +0.1 -0.1 +0.1
supernatant Filtered_supernatant_MT80_in_LB +0.3 +0.2 +0.1 -0.0 -0.1
carbon source L-Aspartic Acid (C) -0.0 +0.3 +0.1 -0.0 +0.1
motility Motility_inner_sample +0.2 -0.2 +0.2 +0.1 +0.3
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.0 +0.2 +0.1 +0.2
carbon source D-Sorbitol (C) -0.1 +0.4 +0.2 +0.1 +0.1
carbon source L-Glutamic (C) +0.3 +0.2 -0.0 -0.1 +0.3
carbon source succinate (C) +0.1 +0.3 -0.0 -0.0 +0.3
carbon source D-Glucose (C) +0.2 +0.4 +0.3 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.4 -0.4 +0.6 +0.6
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