Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS22220 and QEN71_RS22225 are separated by 105 nucleotidesQEN71_RS22225 and QEN71_RS22230 are separated by 203 nucleotidesQEN71_RS22230 and QEN71_RS22235 are separated by 653 nucleotidesQEN71_RS22235 and QEN71_RS22240 are separated by 6 nucleotides QEN71_RS22220: QEN71_RS22220 - outer membrane protein assembly factor BamD, at 4,933,322 to 4,934,179 _RS22220 QEN71_RS22225: QEN71_RS22225 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 4,934,285 to 4,935,589 _RS22225 QEN71_RS22230: QEN71_RS22230 - endonuclease/exonuclease/phosphatase family protein, at 4,935,793 to 4,936,656 _RS22230 QEN71_RS22235: QEN71_RS22235 - 3'-5' exonuclease, at 4,937,310 to 4,938,086 _RS22235 QEN71_RS22240: QEN71_RS22240 - RNA polymerase sigma factor RpoS, at 4,938,093 to 4,939,187 _RS22240
Group Condition QEN71_RS22220 QEN71_RS22225 QEN71_RS22230 QEN71_RS22235 QEN71_RS22240
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.1 +0.0 +0.0 -1.9
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 -0.1 +0.1 -1.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.1 +0.1 -0.2 -1.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.0 -0.1 -0.0 -0.9
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.3 +0.1 -0.1 -0.6
motility Motility_inner_sample N.D. -0.3 -0.2 -0.2 -0.2
coculture Psabiae_ML3b with MT81 N.D. -0.3 -0.1 -0.1 -0.2
carbon source L-Aspartic Acid (C) N.D. +0.0 -0.2 -0.1 -0.5
motility Motility_inner_sample_with_outgrowth N.D. -0.4 -0.0 -0.1 -0.2
supernatant Filtered_supernatant_MT71_in_LB N.D. +0.2 -0.2 -0.2 -0.2
motility Motility_outer_sample N.D. +0.3 -0.1 -0.4 -0.3
carbon source L-Aspartic Acid (C) N.D. +0.2 -0.1 -0.2 -0.2
motility Motility_inner_sample N.D. -0.2 +0.1 -0.1 -0.2
motility Motility_outer_sample_with_outgrowth N.D. -0.1 +0.1 -0.4 +0.1
carbon source D,L-Malic Acid (C) N.D. +0.2 -0.0 -0.2 -0.2
carbon source D,L-Malic Acid (C) N.D. +0.2 +0.1 -0.1 -0.3
carbon source D-Glucose (C) N.D. +0.2 +0.1 -0.1 -0.3
motility Motility_outer_sample N.D. +0.2 -0.1 -0.3 +0.0
carbon source D-Fructose (C) N.D. +0.3 +0.0 -0.1 -0.4
carbon source Fumaric (C) N.D. +0.1 +0.1 -0.2 -0.1
carbon source succinate (C) N.D. +0.1 +0.2 -0.2 -0.1
motility Motility_outer_sample_with_outgrowth N.D. +0.1 +0.1 -0.4 +0.2
carbon source D-Fructose (C) N.D. +0.4 -0.1 -0.1 -0.2
carbon source L-Rhamnose (C) N.D. +0.3 +0.1 +0.1 -0.1
carbon source L-Rhamnose (C) N.D. +0.1 +0.3 -0.0 +0.1
stress LB_noSalt with Chloride 200 mM N.D. +0.5 +0.2 +0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.2 +0.0 -0.2 +0.7
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.2 -0.1 -0.0 +0.7
stress LB_noSalt with Chloride 200 mM N.D. +0.4 +0.1 +0.0 +0.3
carbon source D-Xylose (C) N.D. -0.0 -0.1 -0.0 +1.1
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