Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS22070 and QEN71_RS22075 are separated by 79 nucleotidesQEN71_RS22075 and QEN71_RS22080 are separated by 188 nucleotidesQEN71_RS22080 and QEN71_RS22085 are separated by 108 nucleotidesQEN71_RS22085 and QEN71_RS22090 are separated by 86 nucleotides QEN71_RS22070: QEN71_RS22070 - acetylornithine deacetylase, at 4,896,685 to 4,897,932 _RS22070 QEN71_RS22075: QEN71_RS22075 - threonine/serine dehydratase, at 4,898,012 to 4,899,034 _RS22075 QEN71_RS22080: QEN71_RS22080 - large conductance mechanosensitive channel protein MscL, at 4,899,223 to 4,899,672 _RS22080 QEN71_RS22085: QEN71_RS22085 - response regulator, at 4,899,781 to 4,901,772 _RS22085 QEN71_RS22090: QEN71_RS22090 - response regulator, at 4,901,859 to 4,902,350 _RS22090
Group Condition QEN71_RS22070 QEN71_RS22075 QEN71_RS22080 QEN71_RS22085 QEN71_RS22090
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.3 -0.0 +0.1 -0.4
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 -0.2 -0.1 -0.5
motility Motility_outer_sample_with_outgrowth +0.4 -0.2 -0.3 +0.0 -0.7
motility Motility_outer_sample_with_outgrowth +0.3 -0.0 -0.1 -0.1 -0.7
motility Motility_outer_sample_with_outgrowth +0.0 +0.0 +0.1 -0.2 -0.6
motility Motility_outer_sample +0.3 -0.2 +0.1 +0.0 -0.5
motility Motility_inner_sample +0.3 -0.0 -0.1 -0.1 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.0 -0.2 -0.1 +0.5
carbon source D-Glucose (C) -0.3 -0.1 -0.2 -0.1 +0.9
carbon source D-Fructose (C) -0.2 +0.0 -0.3 -0.1 +1.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.1 -0.1 -0.1 +0.8
stress LB_noSalt with Zinc 0.5 mM +0.2 +0.2 -0.2 -0.1 +0.5
carbon source Fumaric (C) +0.2 +0.0 -0.1 -0.1 +0.6
stress LB_noSalt with Chloride 200 mM +0.2 +0.2 -0.4 +0.0 +0.6
carbon source D,L-Lactate (C) +0.1 +0.0 +0.2 -0.2 +0.6
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.0 -0.1 -0.1 +0.9
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.1 +0.2 +0.0 +0.5
carbon source L-Rhamnose (C) -0.2 +0.0 -0.1 -0.2 +1.1
carbon source D-Fructose (C) -0.0 -0.1 -0.0 -0.2 +1.0
carbon source D,L-Malic Acid (C) +0.0 -0.1 +0.1 -0.1 +0.8
carbon source Fumaric (C) +0.1 +0.0 +0.0 -0.1 +0.7
carbon source L-Rhamnose (C) +0.0 -0.0 -0.1 -0.2 +1.3
carbon source L-Leucine (C) +0.2 -0.1 +0.2 +0.2 +0.4
stress LB_noSalt with Chloride 200 mM +0.4 +0.1 -0.1 -0.0 +0.6
carbon source D-Glucose (C) +0.2 +0.0 -0.2 +0.1 +0.8
carbon source D-Sorbitol (C) +0.1 -0.2 +0.0 +0.0 +1.1
carbon source D,L-Malic Acid (C) +0.3 +0.0 -0.1 +0.2 +0.8
carbon source D-Sorbitol (C) +0.1 +0.1 +0.0 +0.0 +1.0
stress LB_noSalt with Chloride 200 mM +0.2 +0.1 -0.0 +0.2 +1.1
stress LB_noSalt with Chloride 200 mM +0.3 +0.2 +0.1 +0.1 +1.2
remove
QEN71_RS22070
plot		 remove
QEN71_RS22075
plot		 remove
QEN71_RS22080		 remove
QEN71_RS22085
plot		 remove
QEN71_RS22090
plot