Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS21975 and QEN71_RS21980 are separated by 184 nucleotidesQEN71_RS21980 and QEN71_RS21985 are separated by 207 nucleotidesQEN71_RS21985 and QEN71_RS21990 are separated by 182 nucleotidesQEN71_RS21990 and QEN71_RS21995 are separated by 519 nucleotides QEN71_RS21975: QEN71_RS21975 - endopeptidase La, at 4,874,493 to 4,876,910 _RS21975 QEN71_RS21980: QEN71_RS21980 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 4,877,095 to 4,878,366 _RS21980 QEN71_RS21985: QEN71_RS21985 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 4,878,574 to 4,879,233 _RS21985 QEN71_RS21990: QEN71_RS21990 - trigger factor, at 4,879,416 to 4,880,762 _RS21990 QEN71_RS21995: QEN71_RS21995 - glycerate kinase, at 4,881,282 to 4,882,427 _RS21995
Group Condition QEN71_RS21975 QEN71_RS21980 QEN71_RS21985 QEN71_RS21990 QEN71_RS21995
motility Motility_outer_sample_with_outgrowth -4.5 -3.1 N.D. -1.9 -0.0
motility Motility_outer_sample_with_outgrowth -4.7 -3.2 N.D. -1.7 +0.1
motility Motility_outer_sample -4.7 -3.2 N.D. -1.3 +0.3
motility Motility_outer_sample_with_outgrowth -4.5 -3.0 N.D. -1.6 +0.2
motility Motility_outer_sample_with_outgrowth -4.6 -3.1 N.D. -1.3 +0.5
motility Motility_outer_sample -4.7 -3.2 N.D. -0.9 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.2 -2.3 N.D. -0.8 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.3 -2.6 N.D. -0.8 +0.4
carbon source D-Xylose (C) -4.2 -3.0 N.D. +0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.6 -2.4 N.D. -0.5 +0.5
carbon source L-Histidine (C) -4.0 -2.8 N.D. -0.3 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.8 -2.6 N.D. -1.0 +0.5
carbon source D-Sorbitol (C) -4.2 -3.0 N.D. +0.3 +0.4
carbon source L-Leucine (C) -3.5 -3.0 N.D. -0.2 +0.2
carbon source L-Leucine (C) -3.4 -3.2 N.D. -0.0 +0.1
motility Motility_inner_sample -4.0 -1.7 N.D. -0.6 -0.1
carbon source D-Glucose (C) -4.0 -2.9 N.D. +0.3 +0.3
carbon source D-Sorbitol (C) -3.8 -3.2 N.D. +0.4 +0.4
motility Motility_inner_sample_with_outgrowth -3.8 -1.1 N.D. -0.7 +0.0
carbon source L-Histidine (C) -2.7 -2.4 N.D. -0.5 +0.1
motility Motility_inner_sample_with_outgrowth -3.4 -1.4 N.D. -0.7 +0.0
carbon source L-Rhamnose (C) -3.5 -2.3 N.D. +0.3 +0.2
carbon source Fumaric (C) -3.4 -2.3 N.D. +0.0 +0.4
carbon source D-Glucose (C) -3.3 -2.2 N.D. +0.3 +0.0
carbon source L-Rhamnose (C) -3.5 -2.4 N.D. +0.5 +0.2
motility Motility_inner_sample -3.6 -1.2 N.D. -0.8 +0.6
carbon source D-Fructose (C) -3.0 -2.6 N.D. +0.5 +0.1
carbon source D-Fructose (C) -3.1 -2.0 N.D. +0.5 +0.1
carbon source 2-Deoxy-D-Ribose (C) -3.2 -1.8 N.D. +0.9 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.8 +2.6 N.D. -0.7 -0.1
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