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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS21935 and QEN71_RS21940 are separated by 92 nucleotides
QEN71_RS21940 and QEN71_RS21945 overlap by 2 nucleotides
QEN71_RS21945 and QEN71_RS21950 are separated by 142 nucleotides
QEN71_RS21950 and QEN71_RS21955 are separated by 104 nucleotides
QEN71_RS21935: QEN71_RS21935 - glucose-6-phosphate isomerase, at 4,867,861 to 4,869,483
_RS21935
QEN71_RS21940: QEN71_RS21940 - ABC transporter ATP-binding protein, at 4,869,576 to 4,870,262
_RS21940
QEN71_RS21945: QEN71_RS21945 - arylesterase, at 4,870,261 to 4,870,980
_RS21945
QEN71_RS21950: QEN71_RS21950 - hypothetical protein, at 4,871,123 to 4,871,464
_RS21950
QEN71_RS21955: QEN71_RS21955 - SurA N-terminal domain-containing protein, at 4,871,569 to 4,873,497
_RS21955
Group
Condition
QEN71
_RS21935
QEN71
_RS21940
QEN71
_RS21945
QEN71
_RS21950
QEN71
_RS21955
motility
Motility_outer_sample_with_outgrowth
-3.5
+0.1
-0.1
+0.1
-3.1
motility
Motility_outer_sample_with_outgrowth
-3.5
-0.1
-0.1
-0.1
-2.7
motility
Motility_outer_sample_with_outgrowth
-3.7
+0.2
-0.1
+0.1
-2.7
motility
Motility_outer_sample_with_outgrowth
-3.6
+0.5
-0.1
+0.2
-2.7
motility
Motility_inner_sample
-3.1
-0.1
-0.1
-0.2
-1.7
motility
Motility_outer_sample
-3.6
+0.2
-0.1
+0.2
-1.8
motility
Motility_inner_sample_with_outgrowth
-3.5
-0.0
-0.0
+0.1
-1.5
motility
Motility_outer_sample
-3.7
+0.2
+0.1
+0.2
-1.7
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-3.1
+0.2
-0.1
-0.2
-1.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-3.9
+0.3
-0.0
-0.2
-0.9
carbon source
Fumaric (C)
-3.6
-0.1
-0.0
+0.1
-0.7
motility
Motility_inner_sample_with_outgrowth
-2.4
+0.1
-0.1
+0.0
-1.8
motility
Motility_inner_sample
-3.1
+0.2
+0.1
-0.1
-1.3
carbon source
casaminos (C)
-2.9
+0.1
-0.1
-0.0
-1.2
supernatant
Filtered_supernatant_MT81_in_LB
-2.1
-0.2
+0.1
+0.0
-1.7
carbon source
casaminos (C)
-3.2
+0.4
+0.0
-0.1
-1.0
carbon source
D,L-Lactate (C)
-3.1
-0.3
+0.1
+0.1
-0.4
stress
LB_noSalt with Chloride 200 mM
-2.6
+0.1
+0.0
+0.1
-1.1
carbon source
Fumaric (C)
-3.3
+0.4
+0.1
-0.1
-0.5
motility
Motility_inner_sample
-2.4
+0.4
+0.0
+0.1
-1.1
carbon source
D-Sorbitol (C)
-3.3
+0.3
-0.3
-0.0
+0.6
carbon source
D-Xylose (C)
-3.7
+0.0
-0.1
+0.1
+1.0
carbon source
D,L-Lactate (C)
-3.1
+0.8
-0.0
-0.0
-0.2
carbon source
D-Glucose (C)
-3.3
+0.4
-0.1
-0.2
+0.6
carbon source
D-Glucose (C)
-3.1
+0.3
-0.1
+0.0
+0.6
carbon source
D-Sorbitol (C)
-3.3
+0.6
-0.1
+0.1
+0.4
carbon source
2-Deoxy-D-Ribose (C)
-3.2
+0.3
+0.1
-0.0
+0.8
carbon source
D-Fructose (C)
-3.1
+0.3
-0.1
+0.2
+0.9
carbon source
D,L-Malic Acid (C)
-2.7
+0.5
+0.0
+0.1
+0.7
carbon source
D-Fructose (C)
-2.9
+0.8
-0.0
+0.0
+0.7
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QEN71_RS21945
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