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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS21790 and QEN71_RS21795 are separated by 253 nucleotides
QEN71_RS21795 and QEN71_RS21800 are separated by 118 nucleotides
QEN71_RS21800 and QEN71_RS21805 are separated by 51 nucleotides
QEN71_RS21805 and QEN71_RS21810 are separated by 66 nucleotides
QEN71_RS21790: QEN71_RS21790 - alpha,alpha-trehalose-phosphate synthase (UDP-forming), at 4,834,355 to 4,835,785
_RS21790
QEN71_RS21795: QEN71_RS21795 - Rap1a/Tai family immunity protein, at 4,836,039 to 4,836,395
_RS21795
QEN71_RS21800: QEN71_RS21800 - ankyrin repeat domain-containing protein, at 4,836,514 to 4,837,260
_RS21800
QEN71_RS21805: QEN71_RS21805 - TatD family hydrolase, at 4,837,312 to 4,838,103
_RS21805
QEN71_RS21810: QEN71_RS21810 - DNA polymerase III subunit delta', at 4,838,170 to 4,839,219
_RS21810
Group
Condition
QEN71
_RS21790
QEN71
_RS21795
QEN71
_RS21800
QEN71
_RS21805
QEN71
_RS21810
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.3
-2.3
-0.9
N.D.
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.3
-2.4
-0.7
N.D.
motility
Motility_outer_sample_with_outgrowth
+0.1
+0.2
-2.1
-0.9
N.D.
motility
Motility_outer_sample
+0.1
+0.2
-1.9
-0.8
N.D.
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.3
-1.7
-0.8
N.D.
motility
Motility_outer_sample
+0.3
+0.3
-1.8
-0.8
N.D.
motility
Motility_inner_sample
+0.1
+0.1
-0.7
-0.4
N.D.
motility
Motility_inner_sample
+0.1
+0.2
-0.5
-0.5
N.D.
motility
Motility_inner_sample
-0.0
+0.3
-0.4
-0.5
N.D.
motility
Motility_inner_sample
+0.2
+0.2
-0.3
-0.5
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.2
+0.5
-0.5
N.D.
carbon source
D-Xylose (C)
-0.8
-0.2
+1.4
+0.0
N.D.
carbon source
D-Sorbitol (C)
-0.3
-0.4
+1.2
+0.1
N.D.
carbon source
L-Leucine (C)
+0.3
-0.3
+0.8
-0.0
N.D.
carbon source
Fumaric (C)
-0.2
-0.1
+0.9
+0.2
N.D.
carbon source
L-Leucine (C)
+0.3
-0.2
+0.7
+0.0
N.D.
carbon source
D,L-Malic Acid (C)
-0.0
-0.2
+1.1
+0.0
N.D.
carbon source
D,L-Lactate (C)
+0.1
+0.0
+1.0
-0.2
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.1
+0.0
+1.1
+0.0
N.D.
carbon source
Fumaric (C)
-0.0
+0.0
+1.2
-0.1
N.D.
carbon source
D-Sorbitol (C)
-0.3
-0.2
+1.4
+0.2
N.D.
carbon source
D-Glucose (C)
-0.1
-0.2
+1.4
+0.1
N.D.
carbon source
D-Fructose (C)
-0.1
+0.1
+1.2
-0.0
N.D.
carbon source
D-Glucose (C)
-0.1
+0.0
+1.3
+0.0
N.D.
carbon source
L-Rhamnose (C)
+0.1
-0.2
+1.5
-0.1
N.D.
carbon source
D-Fructose (C)
-0.0
-0.2
+1.4
+0.2
N.D.
carbon source
L-Histidine (C)
+0.5
-0.5
+1.5
-0.1
N.D.
carbon source
L-Rhamnose (C)
+0.1
-0.2
+1.5
+0.0
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.0
+0.0
+1.4
+0.0
N.D.
carbon source
L-Histidine (C)
+0.4
-0.5
+1.5
+0.0
N.D.
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QEN71_RS21800
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