Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS21540 and QEN71_RS21545 overlap by 4 nucleotidesQEN71_RS21545 and QEN71_RS21550 overlap by 29 nucleotidesQEN71_RS21550 and QEN71_RS21555 are separated by 172 nucleotidesQEN71_RS21555 and QEN71_RS21560 are separated by 24 nucleotides QEN71_RS21540: QEN71_RS21540 - TerB N-terminal domain-containing protein, at 4,772,193 to 4,774,484 _RS21540 QEN71_RS21545: QEN71_RS21545 - ATP-binding protein, at 4,774,481 to 4,775,791 _RS21545 QEN71_RS21550: QEN71_RS21550 - DEAD/DEAH box helicase, at 4,775,763 to 4,777,997 _RS21550 QEN71_RS21555: QEN71_RS21555 - MDR family MFS transporter, at 4,778,170 to 4,779,681 _RS21555 QEN71_RS21560: QEN71_RS21560 - LysR family transcriptional regulator, at 4,779,706 to 4,780,599 _RS21560
Group Condition QEN71_RS21540 QEN71_RS21545 QEN71_RS21550 QEN71_RS21555 QEN71_RS21560
carbon source L-Rhamnose (C) -0.3 -0.3 -0.2 +0.2 -0.7
stress LB_noSalt with Zinc 0.5 mM -0.3 -0.3 -0.2 +0.0 -0.5
stress LB_noSalt with Zinc 0.5 mM -0.1 -0.1 -0.3 -0.0 -0.6
motility Motility_outer_sample_with_outgrowth -0.4 -0.1 -0.2 +0.1 -0.4
carbon source L-Rhamnose (C) +0.0 -0.3 -0.1 +0.1 -0.6
motility Motility_outer_sample -0.2 -0.4 -0.4 +0.0 +0.1
carbon source D-Fructose (C) -0.2 -0.1 -0.2 +0.1 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.3 -0.1 -0.0 -0.3
carbon source L-Aspartic Acid (C) +0.1 +0.0 +0.0 +0.0 -0.9
carbon source D-Fructose (C) -0.1 -0.4 -0.0 +0.3 -0.4
motility Motility_outer_sample_with_outgrowth -0.2 -0.2 -0.1 +0.1 -0.3
carbon source D,L-Malic Acid (C) +0.1 -0.1 +0.0 +0.0 -0.7
stress LB_noSalt with Chloride 200 mM -0.1 -0.1 +0.0 +0.0 -0.4
motility Motility_outer_sample_with_outgrowth -0.2 -0.2 -0.2 +0.3 -0.3
motility Motility_outer_sample -0.0 -0.2 -0.4 -0.0 +0.3
carbon source D,L-Lactate (C) +0.1 +0.0 -0.1 +0.1 -0.5
supernatant Filtered_supernatant_MT71_in_LB +0.2 -0.0 +0.0 +0.0 -0.4
motility Motility_outer_sample_with_outgrowth -0.1 -0.2 -0.4 +0.1 +0.4
carbon source L-Glutamic (C) -0.1 +0.0 +0.1 +0.2 -0.3
carbon source D-Xylose (C) +0.1 +0.2 -0.1 -0.1 -0.3
motility Motility_inner_sample +0.2 -0.1 -0.1 +0.2 -0.3
carbon source L-Histidine (C) +0.3 +0.1 -0.0 -0.0 -0.4
carbon source Fumaric (C) +0.2 +0.2 -0.1 +0.2 -0.4
supernatant Filtered_supernatant_MT183_in_LB +0.1 +0.2 +0.1 -0.0 -0.3
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.1 +0.5 +0.2 -0.8
carbon source D-Sorbitol (C) +0.3 +0.1 +0.0 +0.1 -0.3
coculture Psabiae_ML3b with MT81 +0.1 +0.2 -0.1 -0.1 +0.6
carbon source succinate (C) +0.1 +0.2 +0.0 +0.2 +0.2
carbon source D-Sorbitol (C) +0.2 +0.2 +0.0 +0.0 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 +0.1 -0.1 +0.2 +0.7
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