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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS21275 and QEN71_RS21280 overlap by 1 nucleotides
QEN71_RS21280 and QEN71_RS21285 are separated by 79 nucleotides
QEN71_RS21285 and QEN71_RS21290 are separated by 43 nucleotides
QEN71_RS21290 and QEN71_RS21295 overlap by 4 nucleotides
QEN71_RS21275: QEN71_RS21275 - 2-aminoethylphosphonate ABC transporter permease subunit, at 4,714,265 to 4,715,188
_RS21275
QEN71_RS21280: QEN71_RS21280 - 2-aminoethylphosphonate ABC transport system, membrane component PhnV, at 4,715,188 to 4,716,048
_RS21280
QEN71_RS21285: QEN71_RS21285 - phosphonate utilization associated transcriptional regulator, at 4,716,128 to 4,716,889
_RS21285
QEN71_RS21290: QEN71_RS21290 - phosphonoacetate hydrolase, at 4,716,933 to 4,718,204
_RS21290
QEN71_RS21295: QEN71_RS21295 - phosphonoacetaldehyde dehydrogenase, at 4,718,201 to 4,719,658
_RS21295
Group
Condition
QEN71
_RS21275
QEN71
_RS21280
QEN71
_RS21285
QEN71
_RS21290
QEN71
_RS21295
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.1
-0.3
+0.1
-0.2
carbon source
L-Leucine (C)
-0.0
-0.4
-0.2
-0.1
-0.0
carbon source
L-Rhamnose (C)
-0.2
+0.1
-0.3
-0.2
+0.0
carbon source
D-Glucose (C)
-0.1
-0.2
-0.1
-0.0
-0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.0
-0.2
-0.2
-0.1
-0.2
motility
Motility_outer_sample_with_outgrowth
-0.2
-0.0
-0.2
-0.0
-0.1
carbon source
2-Deoxy-D-Ribose (C)
-0.1
+0.1
-0.1
-0.1
-0.3
stress
LB_noSalt with Chloride 200 mM
+0.1
-0.5
-0.1
-0.1
+0.1
carbon source
casaminos (C)
+0.1
-0.1
-0.3
-0.1
-0.1
carbon source
D-Sorbitol (C)
-0.2
+0.1
+0.1
-0.2
-0.1
carbon source
L-Histidine (C)
+0.1
-0.1
-0.1
-0.2
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
-0.0
+0.1
-0.2
-0.2
carbon source
L-Glutamic (C)
+0.0
-0.1
-0.1
-0.1
+0.2
supernatant
Filtered_supernatant_MT71_in_LB
-0.1
-0.2
+0.1
+0.0
-0.0
carbon source
L-Aspartic Acid (C)
+0.0
+0.1
-0.2
+0.1
-0.1
carbon source
Fumaric (C)
+0.0
+0.2
-0.2
-0.1
-0.0
motility
Motility_inner_sample_with_outgrowth
+0.0
+0.2
-0.1
-0.1
-0.1
carbon source
L-Rhamnose (C)
-0.1
+0.1
-0.2
-0.1
+0.1
motility
Motility_inner_sample
-0.2
+0.0
+0.2
-0.1
+0.0
carbon source
D-Xylose (C)
-0.2
+0.3
-0.2
-0.0
-0.1
supernatant
Filtered_supernatant_MT80_in_LB
-0.2
+0.1
-0.0
-0.1
+0.1
stress
LB_noSalt with Cobalt chloride 0.25 mM
+0.1
+0.3
-0.2
-0.1
-0.0
stress
LB_noSalt with Zinc 0.5 mM
-0.0
+0.2
-0.1
-0.1
+0.2
motility
Motility_outer_sample_with_outgrowth
+0.2
+0.1
-0.2
+0.0
-0.0
carbon source
Fumaric (C)
+0.1
+0.3
-0.0
-0.2
-0.0
stress
LB_noSalt with Chloride 200 mM
-0.1
+0.3
-0.1
-0.0
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.5
+0.0
+0.0
-0.1
carbon source
D,L-Malic Acid (C)
+0.2
+0.2
+0.1
-0.1
+0.0
motility
Motility_outer_sample
-0.0
+0.0
-0.1
+0.2
+0.2
stress
LB_noSalt with Chloride 200 mM
-0.0
+0.6
-0.1
+0.1
-0.1
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QEN71_RS21285
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