Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	QEN71_RS21020	QEN71_RS21025	QEN71_RS21030	QEN71_RS21035	QEN71_RS21040
in planta	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.1	-0.1	-0.1	-0.8	-0.2
motility	Motility_outer_sample_with_outgrowth	-0.3	-0.4	-0.3	-0.1	-0.1
carbon source	2-Deoxy-D-Ribose (C)	-0.1	-0.1	+0.1	-0.8	-0.2
motility	Motility_outer_sample_with_outgrowth	-0.3	-0.2	-0.0	-0.5	-0.1
motility	Motility_outer_sample	-0.5	-0.3	+0.2	-0.3	-0.2
coculture	Psabiae_ML3b with MT81	-0.2	-0.3	+0.0	-0.2	-0.2
in planta	Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.2	+0.0	+0.1	-0.6	-0.2
carbon source	D,L-Malic Acid (C)	-0.2	-0.3	+0.1	-0.6	+0.2
carbon source	casaminos (C)	-0.0	-0.5	+0.1	-0.5	+0.2
carbon source	L-Glutamic (C)	-0.0	-0.1	+0.2	-0.5	-0.2
motility	Motility_inner_sample_with_outgrowth	-0.3	-0.3	-0.0	-0.4	+0.4
stress	LB_noSalt with Chloride 200 mM	-0.0	-0.4	-0.0	-0.6	+0.5
motility	Motility_outer_sample_with_outgrowth	-0.3	-0.2	+0.0	+0.1	-0.2
supernatant	Filtered_supernatant_MT81_in_LB	+0.1	-0.1	+0.1	-0.6	-0.0
motility	Motility_inner_sample	+0.0	-0.5	+0.1	-0.4	+0.2
carbon source	D-Glucose (C)	-0.3	+0.0	-0.0	-0.6	+0.4
in planta	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.1	-0.2	+0.0	-0.6	+0.3
in planta	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.3	+0.4	-0.0	+0.0	-0.5
carbon source	L-Histidine (C)	-0.2	+0.1	-0.0	-0.6	+0.3
carbon source	D-Fructose (C)	-0.1	+0.3	+0.1	-0.8	+0.3
motility	Motility_outer_sample_with_outgrowth	-0.2	-0.4	+0.0	+0.4	+0.2
stress	LB_noSalt with Cobalt chloride 0.25 mM	-0.3	-0.1	+0.1	-0.1	+0.3
carbon source	D-Glucose (C)	-0.1	-0.1	-0.2	+0.2	+0.2
carbon source	casaminos (C)	-0.3	+0.5	+0.0	-0.5	+0.3
carbon source	D-Sorbitol (C)	-0.4	+0.3	-0.1	-0.1	+0.4
stress	LB_noSalt with Chloride 200 mM	+0.1	-0.0	-0.1	-0.4	+0.8
stress	LB_noSalt with Chloride 200 mM	-0.0	-0.5	+0.1	-0.1	+0.9
carbon source	D-Sorbitol (C)	+0.2	+0.1	+0.1	+0.3	+0.3
stress	LB_noSalt with Zinc 0.5 mM	+0.0	-0.2	-0.1	+0.4	+1.3
stress	LB_noSalt with Zinc 0.5 mM	+0.2	+0.3	+0.1	-0.2	+1.3