Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS20985 and QEN71_RS20990 are separated by 130 nucleotidesQEN71_RS20990 and QEN71_RS20995 are separated by 16 nucleotidesQEN71_RS20995 and QEN71_RS21000 are separated by 130 nucleotidesQEN71_RS21000 and QEN71_RS21005 are separated by 308 nucleotides QEN71_RS20985: QEN71_RS20985 - energy transducer TonB, at 4,651,998 to 4,652,366 _RS20985 QEN71_RS20990: QEN71_RS20990 - quinone oxidoreductase, at 4,652,497 to 4,653,465 _RS20990 QEN71_RS20995: QEN71_RS20995 - alpha/beta hydrolase, at 4,653,482 to 4,654,225 _RS20995 QEN71_RS21000: QEN71_RS21000 - DUF4148 domain-containing protein, at 4,654,356 to 4,654,685 _RS21000 QEN71_RS21005: QEN71_RS21005 - cytochrome c biogenesis protein DipZ, at 4,654,994 to 4,656,751 _RS21005
Group Condition QEN71_RS20985 QEN71_RS20990 QEN71_RS20995 QEN71_RS21000 QEN71_RS21005
carbon source D,L-Malic Acid (C) +0.2 -0.4 -0.2 -1.4 -0.0
supernatant Filtered_supernatant_MT80_in_LB -0.1 -1.0 +0.1 -1.0 +0.2
carbon source D,L-Lactate (C) +0.1 -1.4 -0.0 -0.5 +0.1
motility Motility_outer_sample_with_outgrowth -0.7 +0.0 -0.1 -0.3 -0.5
motility Motility_inner_sample +0.4 -0.5 -0.2 -1.1 -0.2
carbon source L-Rhamnose (C) +0.2 -1.0 +0.1 -1.0 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 +0.1 -0.7 -0.2 -0.1
carbon source D-Glucose (C) -0.2 -0.7 -0.9 +0.3 +0.1
motility Motility_inner_sample +0.1 -0.5 +0.6 -1.6 +0.2
carbon source Fumaric (C) +0.1 -0.2 -0.1 -1.0 +0.1
stress LB_noSalt with Zinc 0.5 mM +0.1 +0.1 -0.1 -1.2 -0.1
supernatant Filtered_supernatant_MT183_in_LB +0.3 -0.6 +0.4 -1.1 +0.2
carbon source D-Fructose (C) -0.2 -0.3 +0.4 -0.2 -0.4
carbon source L-Rhamnose (C) +0.2 +0.3 -0.4 -0.8 -0.0
carbon source Fumaric (C) +0.3 -0.5 -0.4 -0.1 +0.2
stress LB_noSalt with Chloride 200 mM +0.1 -0.8 +0.1 -0.3 +0.5
motility Motility_inner_sample +0.2 -0.3 +0.2 -0.7 +0.1
carbon source D-Xylose (C) +0.3 -0.9 +0.0 +0.6 -0.3
carbon source D,L-Malic Acid (C) +0.2 -0.7 +0.3 +0.4 -0.1
stress LB_noSalt with Chloride 200 mM -0.0 -0.4 +0.6 +0.3 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 -0.7 +0.1 +0.5 +0.1
coculture Psabiae_ML3b with MT80 +0.0 -0.2 -0.2 +0.7 +0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.5 +0.3 +0.4 +0.2
motility Motility_inner_sample +0.4 -0.5 +0.1 +0.6 +0.0
carbon source L-Aspartic Acid (C) +0.3 +0.3 -0.2 +0.5 -0.1
supernatant Filtered_supernatant_MT71_in_LB +0.4 -0.2 -0.2 +0.7 +0.2
carbon source L-Aspartic Acid (C) +0.2 -0.2 -0.1 +0.9 +0.1
carbon source D-Sorbitol (C) +0.7 -0.3 +0.7 -0.1 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.1 -0.2 +1.3 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.1 +0.6 +0.7 +0.0
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QEN71_RS20985
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QEN71_RS20990
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