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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS19270 and QEN71_RS19275 are separated by 110 nucleotides
QEN71_RS19275 and QEN71_RS19280 are separated by 542 nucleotides
QEN71_RS19280 and QEN71_RS19285 are separated by 51 nucleotides
QEN71_RS19285 and QEN71_RS19290 are separated by 400 nucleotides
QEN71_RS19270: QEN71_RS19270 - alpha/beta fold hydrolase, at 4,291,084 to 4,292,247
_RS19270
QEN71_RS19275: QEN71_RS19275 - LysR family transcriptional regulator, at 4,292,358 to 4,293,326
_RS19275
QEN71_RS19280: QEN71_RS19280 - Na+/H+ antiporter NhaA, at 4,293,869 to 4,295,095
_RS19280
QEN71_RS19285: QEN71_RS19285 - YXWGXW repeat-containing protein, at 4,295,147 to 4,295,485
_RS19285
QEN71_RS19290: QEN71_RS19290 - hypothetical protein, at 4,295,886 to 4,296,245
_RS19290
Group
Condition
QEN71
_RS19270
QEN71
_RS19275
QEN71
_RS19280
QEN71
_RS19285
QEN71
_RS19290
stress
LB_noSalt with Chloride 200 mM
-0.0
-0.2
-0.3
-0.4
-0.4
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
-0.3
-0.5
-0.2
-0.3
carbon source
D-Sorbitol (C)
-0.0
+0.0
-0.2
-0.0
-0.8
motility
Motility_inner_sample
+0.3
-0.4
-0.2
+0.1
-0.6
carbon source
D-Fructose (C)
+0.2
-0.2
-0.2
-0.4
-0.3
stress
LB_noSalt with Chloride 200 mM
+0.1
-0.1
-0.2
-0.3
-0.3
carbon source
casaminos (C)
+0.1
-0.2
-0.2
-0.1
-0.4
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.2
-0.3
-0.2
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.2
-0.1
-0.1
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.4
-0.5
-0.0
+0.1
carbon source
succinate (C)
+0.2
-0.2
-0.1
-0.3
-0.1
stress
LB_noSalt with Zinc 0.5 mM
+0.4
-0.0
-0.2
-0.2
-0.5
carbon source
D-Xylose (C)
+0.0
+0.3
-0.0
-0.1
-0.6
motility
Motility_inner_sample
+0.2
+0.0
+0.0
+0.0
-0.6
motility
Motility_inner_sample_with_outgrowth
+0.3
-0.1
+0.0
-0.1
-0.4
carbon source
L-Leucine (C)
+0.2
-0.3
-0.5
+0.1
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.0
+0.3
-0.5
+0.2
-0.3
carbon source
D-Fructose (C)
+0.2
-0.1
+0.1
-0.1
-0.4
supernatant
Filtered_supernatant_MT71_in_LB
-0.1
-0.4
+0.2
-0.2
+0.3
carbon source
D,L-Malic Acid (C)
+0.2
-0.1
+0.2
+0.0
-0.5
carbon source
L-Rhamnose (C)
+0.4
-0.1
-0.2
+0.1
-0.3
supernatant
Filtered_supernatant_MT80_in_LB
+0.2
+0.0
-0.3
+0.3
-0.3
carbon source
D-Glucose (C)
-0.0
-0.3
+0.1
-0.2
+0.3
carbon source
D,L-Lactate (C)
+0.3
-0.2
-0.2
-0.1
+0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.1
-0.1
+0.2
-0.3
supernatant
Filtered_supernatant_MT183_in_LB
+0.3
-0.2
+0.0
+0.1
-0.3
carbon source
L-Histidine (C)
+0.3
-0.1
+0.1
-0.1
-0.2
carbon source
L-Aspartic Acid (C)
+0.3
-0.5
-0.0
+0.2
+0.1
carbon source
Fumaric (C)
+0.3
-0.3
+0.0
+0.2
+0.3
coculture
Psabiae_ML3b with MT81
-0.0
-0.2
+0.0
+0.2
+0.4
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