Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS19080 and QEN71_RS19085 are separated by 75 nucleotidesQEN71_RS19085 and QEN71_RS19090 are separated by 682 nucleotidesQEN71_RS19090 and QEN71_RS19095 are separated by 30 nucleotidesQEN71_RS19095 and QEN71_RS19100 overlap by 4 nucleotides QEN71_RS19080: QEN71_RS19080 - HU family DNA-binding protein, at 4,244,017 to 4,244,295 _RS19080 QEN71_RS19085: QEN71_RS19085 - alpha/beta hydrolase, at 4,244,371 to 4,245,204 _RS19085 QEN71_RS19090: QEN71_RS19090 - IS66 family transposase, at 4,245,887 to 4,247,473 _RS19090 QEN71_RS19095: QEN71_RS19095 - IS66 family insertion sequence element accessory protein TnpB, at 4,247,504 to 4,247,848 _RS19095 QEN71_RS19100: QEN71_RS19100 - transposase, at 4,247,845 to 4,248,327 _RS19100
Group Condition QEN71_RS19080 QEN71_RS19085 QEN71_RS19090 QEN71_RS19095 QEN71_RS19100
carbon source Fumaric (C) -1.2 -0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -1.1 -0.0 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM -0.9 +0.1 N.D. N.D. N.D.
carbon source L-Leucine (C) -0.9 +0.0 N.D. N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.7 -0.1 N.D. N.D. N.D.
carbon source L-Aspartic Acid (C) -0.7 -0.1 N.D. N.D. N.D.
motility Motility_inner_sample -0.8 +0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.5 -0.1 N.D. N.D. N.D.
carbon source D-Sorbitol (C) -0.4 -0.2 N.D. N.D. N.D.
carbon source D,L-Lactate (C) -0.6 -0.0 N.D. N.D. N.D.
carbon source D-Fructose (C) -0.5 -0.1 N.D. N.D. N.D.
carbon source L-Glutamic (C) -0.4 -0.1 N.D. N.D. N.D.
motility Motility_inner_sample -0.1 -0.3 N.D. N.D. N.D.
carbon source casaminos (C) -0.2 -0.2 N.D. N.D. N.D.
carbon source Fumaric (C) -0.6 +0.2 N.D. N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM -0.3 -0.1 N.D. N.D. N.D.
carbon source D-Glucose (C) -0.4 +0.1 N.D. N.D. N.D.
coculture Psabiae_ML3b with MT81 -0.4 +0.0 N.D. N.D. N.D.
carbon source D-Fructose (C) -0.5 +0.2 N.D. N.D. N.D.
carbon source D-Sorbitol (C) -0.5 +0.1 N.D. N.D. N.D.
motility Motility_inner_sample_with_outgrowth -0.3 +0.1 N.D. N.D. N.D.
supernatant Filtered_supernatant_MT71_in_LB +0.2 -0.3 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.4 +0.3 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM -0.2 +0.4 N.D. N.D. N.D.
carbon source L-Leucine (C) +0.4 -0.1 N.D. N.D. N.D.
carbon source D,L-Lactate (C) +0.5 -0.1 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.2 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM +0.1 +0.3 N.D. N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM +0.6 +0.1 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.7 +0.2 N.D. N.D. N.D.
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