Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS18680 and QEN71_RS18685 are separated by 52 nucleotidesQEN71_RS18685 and QEN71_RS18690 are separated by 139 nucleotidesQEN71_RS18690 and QEN71_RS18695 are separated by 203 nucleotidesQEN71_RS18695 and QEN71_RS18700 are separated by 296 nucleotides QEN71_RS18680: QEN71_RS18680 - acetoacetate--CoA ligase, at 4,157,472 to 4,159,484 _RS18680 QEN71_RS18685: QEN71_RS18685 - MFS transporter, at 4,159,537 to 4,160,877 _RS18685 QEN71_RS18690: QEN71_RS18690 - 3-keto-5-aminohexanoate cleavage protein, at 4,161,017 to 4,162,072 _RS18690 QEN71_RS18695: QEN71_RS18695 - AraC family transcriptional regulator, at 4,162,276 to 4,163,271 _RS18695 QEN71_RS18700: QEN71_RS18700 - electron transfer flavoprotein subunit beta/FixA family protein, at 4,163,568 to 4,164,317 _RS18700
Group Condition QEN71_RS18680 QEN71_RS18685 QEN71_RS18690 QEN71_RS18695 QEN71_RS18700
carbon source Fumaric (C) -0.4 -0.0 -0.3 +0.1 N.D.
motility Motility_inner_sample -0.4 -0.2 +0.1 -0.1 N.D.
motility Motility_inner_sample -0.3 +0.1 -0.3 +0.1 N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.1 -0.3 -0.0 N.D.
carbon source D,L-Malic Acid (C) -0.2 +0.2 -0.6 +0.2 N.D.
carbon source L-Aspartic Acid (C) -0.1 -0.0 -0.4 +0.2 N.D.
carbon source D-Sorbitol (C) -0.2 +0.1 -0.3 -0.0 N.D.
motility Motility_inner_sample -0.3 -0.1 -0.1 +0.2 N.D.
supernatant Filtered_supernatant_MT183_in_LB +0.1 +0.2 -0.6 -0.0 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 +0.1 -0.3 +0.1 N.D.
stress LB_noSalt with Chloride 200 mM -0.0 +0.2 -0.4 +0.0 N.D.
carbon source succinate (C) +0.0 +0.3 -0.4 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.0 +0.2 -0.3 -0.0 N.D.
carbon source L-Rhamnose (C) +0.2 -0.2 -0.2 +0.0 N.D.
stress LB_noSalt with Zinc 0.5 mM +0.1 +0.1 -0.5 +0.2 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.1 +0.4 -0.2 N.D.
motility Motility_outer_sample_with_outgrowth -0.2 +0.3 -0.1 +0.0 N.D.
carbon source D-Glucose (C) +0.1 +0.1 +0.2 -0.1 N.D.
carbon source D-Fructose (C) -0.1 +0.4 +0.2 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.5 +0.0 -0.1 N.D.
motility Motility_outer_sample_with_outgrowth -0.1 +0.2 +0.1 +0.1 N.D.
motility Motility_outer_sample -0.1 +0.2 +0.1 +0.2 N.D.
carbon source D-Xylose (C) -0.2 +0.4 +0.0 +0.2 N.D.
carbon source Fumaric (C) -0.0 -0.0 +0.3 +0.2 N.D.
carbon source L-Histidine (C) +0.3 +0.1 +0.1 -0.1 N.D.
carbon source D-Sorbitol (C) +0.3 +0.4 -0.0 -0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.2 +0.2 +0.1 N.D.
carbon source L-Rhamnose (C) +0.2 +0.2 +0.2 +0.3 N.D.
carbon source L-Leucine (C) +0.2 +0.4 +0.2 +0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.3 +0.1 +0.1 N.D.
remove
QEN71_RS18680
plot		 remove
QEN71_RS18685
plot		 remove
QEN71_RS18690		 remove
QEN71_RS18695
plot		 remove
QEN71_RS18700
plot