Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS18415 and QEN71_RS18420 are separated by 10 nucleotidesQEN71_RS18420 and QEN71_RS18425 overlap by 4 nucleotidesQEN71_RS18425 and QEN71_RS18430 are separated by 93 nucleotidesQEN71_RS18430 and QEN71_RS18435 are separated by 15 nucleotides QEN71_RS18415: QEN71_RS18415 - formate dehydrogenase-N subunit alpha, at 4,101,318 to 4,104,389 _RS18415 QEN71_RS18420: QEN71_RS18420 - formate dehydrogenase subunit beta, at 4,104,400 to 4,105,338 _RS18420 QEN71_RS18425: QEN71_RS18425 - formate dehydrogenase subunit gamma, at 4,105,335 to 4,105,970 _RS18425 QEN71_RS18430: QEN71_RS18430 - formate dehydrogenase accessory protein FdhE, at 4,106,064 to 4,106,996 _RS18430 QEN71_RS18435: QEN71_RS18435 - L-seryl-tRNA(Sec) selenium transferase, at 4,107,012 to 4,108,457 _RS18435
Group Condition QEN71_RS18415 QEN71_RS18420 QEN71_RS18425 QEN71_RS18430 QEN71_RS18435
carbon source L-Aspartic Acid (C) -0.0 -0.2 -0.1 -0.4 +0.0
carbon source D-Sorbitol (C) +0.0 -0.3 -0.1 -0.0 -0.2
stress LB_noSalt with Chloride 200 mM +0.0 -0.3 +0.0 -0.0 -0.2
motility Motility_inner_sample -0.1 -0.3 +0.0 +0.1 -0.2
carbon source D,L-Malic Acid (C) +0.0 -0.2 +0.1 -0.2 +0.0
stress LB_noSalt with Chloride 200 mM -0.1 +0.0 -0.1 -0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.3 +0.3 -0.0 -0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.2 +0.2 -0.2 -0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.1 -0.1 -0.3 +0.1
carbon source Fumaric (C) -0.1 -0.1 +0.2 -0.1 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.2 -0.1 +0.3 -0.1
carbon source L-Histidine (C) +0.1 -0.2 +0.2 +0.3 -0.4
motility Motility_outer_sample_with_outgrowth +0.1 -0.1 +0.2 -0.2 -0.0
carbon source D,L-Malic Acid (C) +0.1 -0.3 +0.3 +0.0 -0.1
motility Motility_outer_sample_with_outgrowth -0.1 +0.1 +0.2 -0.1 +0.0
carbon source D,L-Lactate (C) -0.1 -0.1 +0.2 -0.1 +0.1
motility Motility_outer_sample_with_outgrowth +0.0 +0.1 +0.2 -0.3 +0.0
carbon source D-Glucose (C) -0.1 -0.1 +0.0 -0.1 +0.3
carbon source casaminos (C) -0.1 -0.1 +0.2 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.2 +0.1 +0.0 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.2 +0.1 -0.1 +0.4
supernatant Filtered_supernatant_MT71_in_LB -0.0 -0.2 +0.2 +0.1 +0.1
stress LB_noSalt with Zinc 0.5 mM +0.1 -0.2 +0.1 +0.1 +0.2
supernatant Filtered_supernatant_MT80_in_LB +0.0 -0.1 -0.1 +0.2 +0.4
carbon source L-Aspartic Acid (C) +0.1 -0.1 +0.1 +0.2 +0.1
motility Motility_inner_sample_with_outgrowth +0.0 -0.1 +0.1 +0.1 +0.2
supernatant Filtered_supernatant_MT81_in_LB +0.1 -0.0 +0.2 -0.0 +0.2
coculture Psabiae_ML3b with MT81 +0.1 -0.1 +0.1 +0.1 +0.3
motility Motility_outer_sample +0.1 -0.0 +0.1 -0.0 +0.4
motility Motility_outer_sample +0.1 +0.2 +0.2 +0.1 +0.1
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