Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS18225 and QEN71_RS18230 are separated by 52 nucleotidesQEN71_RS18230 and QEN71_RS18235 are separated by 2 nucleotidesQEN71_RS18235 and QEN71_RS18240 are separated by 13 nucleotidesQEN71_RS18240 and QEN71_RS18245 are separated by 20 nucleotides QEN71_RS18225: QEN71_RS18225 - glutathione S-transferase, at 4,053,879 to 4,054,520 _RS18225 QEN71_RS18230: QEN71_RS18230 - pyridoxamine 5'-phosphate oxidase family protein, at 4,054,573 to 4,056,609 _RS18230 QEN71_RS18235: QEN71_RS18235 - hypothetical protein, at 4,056,612 to 4,056,962 _RS18235 QEN71_RS18240: QEN71_RS18240 - RNA polymerase sigma factor, at 4,056,976 to 4,057,695 _RS18240 QEN71_RS18245: QEN71_RS18245 - cupredoxin family copper-binding protein, at 4,057,716 to 4,058,030 _RS18245
Group Condition QEN71_RS18225 QEN71_RS18230 QEN71_RS18235 QEN71_RS18240 QEN71_RS18245
motility Motility_outer_sample_with_outgrowth -0.1 -0.2 -0.6 -0.5 -0.0
motility Motility_outer_sample_with_outgrowth +0.1 -0.2 -0.4 -0.3 -0.1
motility Motility_inner_sample -0.3 -0.2 -0.5 +0.3 -0.2
supernatant Filtered_supernatant_MT183_in_LB -0.6 -0.2 -0.3 +0.3 -0.0
motility Motility_outer_sample_with_outgrowth -0.2 -0.0 -0.5 +0.1 -0.1
motility Motility_inner_sample_with_outgrowth -0.2 +0.1 -0.4 +0.1 -0.0
carbon source D-Sorbitol (C) -0.2 +0.0 -0.5 +0.6 -0.2
coculture Psabiae_ML3b with MT80 -0.2 -0.1 -0.1 -0.2 +0.2
stress LB_noSalt with Zinc 0.5 mM -0.1 -0.2 -0.2 -0.1 +0.3
supernatant Filtered_supernatant_MT71_in_LB -0.2 +0.1 -0.3 +0.1 +0.2
carbon source D-Sorbitol (C) -0.1 +0.0 -0.2 -0.1 +0.3
carbon source Fumaric (C) -0.1 +0.1 -0.4 -0.1 +0.4
motility Motility_inner_sample -0.0 -0.2 -0.2 +0.3 +0.2
supernatant Filtered_supernatant_MT80_in_LB -0.2 -0.1 +0.1 +0.5 +0.0
stress LB_noSalt with Zinc 0.5 mM -0.0 -0.2 +0.3 -0.1 +0.3
carbon source L-Aspartic Acid (C) -0.3 +0.1 +0.1 -0.0 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.1 -0.2 -0.2 +0.5
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.1 +0.1 +0.3 -0.2
carbon source L-Aspartic Acid (C) -0.3 +0.1 +0.1 +0.1 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.1 -0.1 +0.1 +0.4
motility Motility_outer_sample +0.2 -0.2 +0.3 +0.3 -0.1
carbon source D,L-Malic Acid (C) -0.2 +0.1 +0.2 +0.3 +0.0
stress LB_noSalt with Cobalt chloride 0.25 mM +0.3 +0.1 -0.2 +0.3 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.2 -0.1 +0.3 +0.1
carbon source succinate (C) +0.3 +0.0 -0.1 +0.4 +0.1
carbon source L-Glutamic (C) -0.1 +0.2 +0.0 +0.2 +0.5
carbon source L-Leucine (C) -0.0 +0.1 +0.2 +0.3 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.0 -0.0 +0.3 +1.2
carbon source L-Rhamnose (C) +0.1 -0.0 +0.2 +0.3 +0.7
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.0 +0.1 +0.5 +0.4
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