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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS17755 and QEN71_RS17760 are separated by 2 nucleotides
QEN71_RS17760 and QEN71_RS17765 are separated by 720 nucleotides
QEN71_RS17765 and QEN71_RS17770 are separated by 20 nucleotides
QEN71_RS17770 and QEN71_RS17775 overlap by 4 nucleotides
QEN71_RS17755: QEN71_RS17755 - GMC family oxidoreductase, at 3,958,458 to 3,960,059
_RS17755
QEN71_RS17760: QEN71_RS17760 - cytochrome c, at 3,960,062 to 3,961,513
_RS17760
QEN71_RS17765: QEN71_RS17765 - metallophosphoesterase, at 3,962,234 to 3,962,971
_RS17765
QEN71_RS17770: QEN71_RS17770 - RES family NAD+ phosphorylase, at 3,962,992 to 3,963,693
_RS17770
QEN71_RS17775: QEN71_RS17775 - MbcA/ParS/Xre antitoxin family protein, at 3,963,690 to 3,964,127
_RS17775
Group
Condition
QEN71
_RS17755
QEN71
_RS17760
QEN71
_RS17765
QEN71
_RS17770
QEN71
_RS17775
carbon source
D,L-Malic Acid (C)
-0.3
-0.2
-0.4
-0.2
-0.2
motility
Motility_inner_sample
-0.0
-0.1
-0.3
-0.5
+0.0
carbon source
D,L-Malic Acid (C)
-0.2
-0.1
-0.3
-0.1
-0.2
carbon source
D-Xylose (C)
-0.2
-0.3
-0.2
+0.1
-0.2
carbon source
Fumaric (C)
-0.0
-0.2
-0.2
-0.3
-0.1
carbon source
D-Sorbitol (C)
-0.4
-0.1
-0.4
-0.0
-0.0
carbon source
D-Glucose (C)
-0.2
-0.2
-0.5
-0.0
+0.1
motility
Motility_inner_sample
+0.0
-0.0
-0.7
+0.1
-0.1
carbon source
D-Fructose (C)
-0.0
-0.2
-0.3
-0.2
-0.1
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.1
-0.5
+0.0
-0.0
motility
Motility_inner_sample
-0.0
-0.1
-0.4
-0.1
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.0
-0.1
+0.1
-0.4
-0.4
motility
Motility_inner_sample_with_outgrowth
-0.0
-0.1
-0.4
-0.1
-0.2
supernatant
Filtered_supernatant_MT183_in_LB
-0.1
-0.0
-0.4
+0.0
-0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-0.2
-0.3
-0.0
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
+0.0
-0.1
-0.3
-0.0
motility
Motility_inner_sample
-0.2
-0.0
-0.4
-0.1
+0.1
motility
Motility_inner_sample_with_outgrowth
+0.1
-0.1
-0.3
-0.1
-0.1
carbon source
L-Leucine (C)
-0.1
-0.1
-0.2
-0.1
+0.0
stress
LB_noSalt with Zinc 0.5 mM
+0.0
+0.0
-0.5
+0.1
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-0.1
-0.3
-0.1
+0.2
carbon source
Fumaric (C)
+0.2
-0.0
-0.4
-0.1
-0.0
carbon source
D-Glucose (C)
-0.2
-0.3
+0.2
-0.1
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.0
+0.2
-0.3
-0.1
motility
Motility_outer_sample_with_outgrowth
-0.1
+0.0
-0.5
+0.1
+0.2
motility
Motility_outer_sample
-0.1
-0.0
-0.5
+0.3
+0.2
motility
Motility_outer_sample
-0.1
-0.2
-0.3
+0.3
+0.2
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.1
-0.3
+0.3
+0.2
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.0
-0.5
+0.4
+0.3
motility
Motility_outer_sample_with_outgrowth
+0.1
+0.0
-0.3
+0.2
+0.3
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QEN71_RS17765
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