Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS16975 and QEN71_RS16980 are separated by 64 nucleotidesQEN71_RS16980 and QEN71_RS16985 are separated by 110 nucleotidesQEN71_RS16985 and QEN71_RS16990 overlap by 4 nucleotidesQEN71_RS16990 and QEN71_RS16995 are separated by 66 nucleotides QEN71_RS16975: QEN71_RS16975 - hypothetical protein, at 3,758,374 to 3,758,610 _RS16975 QEN71_RS16980: QEN71_RS16980 - LysR family transcriptional regulator, at 3,758,675 to 3,759,601 _RS16980 QEN71_RS16985: QEN71_RS16985 - CaiB/BaiF CoA-transferase family protein, at 3,759,712 to 3,760,905 _RS16985 QEN71_RS16990: QEN71_RS16990 - hydroxymethylglutaryl-CoA lyase, at 3,760,902 to 3,761,849 _RS16990 QEN71_RS16995: QEN71_RS16995 - MFS transporter, at 3,761,916 to 3,763,259 _RS16995
Group Condition QEN71_RS16975 QEN71_RS16980 QEN71_RS16985 QEN71_RS16990 QEN71_RS16995
carbon source D-Xylose (C) -0.6 -0.4 +0.1 -0.1 -0.0
stress LB_noSalt with Zinc 0.5 mM -1.2 +0.0 +0.1 +0.2 +0.1
carbon source D-Fructose (C) -0.6 -0.0 +0.1 -0.2 +0.0
carbon source D-Sorbitol (C) +0.3 -0.4 -0.1 -0.4 -0.1
carbon source L-Histidine (C) -0.3 -0.1 -0.1 -0.2 +0.1
carbon source casaminos (C) -0.4 -0.2 -0.2 +0.2 +0.1
motility Motility_inner_sample_with_outgrowth -0.9 -0.1 +0.1 +0.4 +0.0
carbon source D-Fructose (C) -0.2 -0.5 +0.1 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.3 +0.1 -0.0 -0.1
carbon source L-Leucine (C) -0.4 -0.3 +0.1 +0.0 -0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 +0.4 +0.4 -0.4 +0.2
motility Motility_outer_sample -0.3 +0.2 +0.3 -0.4 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.3 -0.2 -0.5 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.1 -0.3 +0.2 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.2 +0.3 +0.1 -0.2
motility Motility_outer_sample_with_outgrowth +0.4 -0.1 -0.1 -0.2 -0.1
carbon source D,L-Malic Acid (C) -0.2 -0.1 +0.4 -0.0 +0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 -0.1 +0.3 -0.1 -0.0
carbon source D-Sorbitol (C) +0.5 -0.3 +0.0 +0.1 +0.0
stress LB_noSalt with Chloride 200 mM +0.6 -0.3 -0.1 +0.2 +0.0
stress LB_noSalt with Chloride 200 mM +0.6 +0.2 +0.0 -0.3 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 -0.2 +0.1 -0.0 +0.1
motility Motility_outer_sample +0.1 +0.1 -0.1 +0.4 -0.2
carbon source D,L-Malic Acid (C) +0.6 -0.2 +0.0 -0.1 +0.1
carbon source succinate (C) +0.6 -0.2 -0.1 +0.1 +0.1
coculture Psabiae_ML3b with MT81 -0.1 +0.5 +0.0 +0.3 -0.1
motility Motility_outer_sample_with_outgrowth -0.4 +0.4 +0.3 +0.2 +0.0
carbon source succinate (C) +0.3 -0.1 -0.0 +0.3 +0.0
stress LB_noSalt with Chloride 200 mM +0.5 -0.0 +0.0 +0.3 +0.1
motility Motility_outer_sample_with_outgrowth +0.5 +0.1 +0.4 +0.1 -0.2
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